blob: cfecd67c187174d46f77da18fee5c4d7a6490f86 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
|
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
inherit eutils toolchain-funcs
MY_P="${PN}_v${PV/./_}"
DESCRIPTION="Probabilistic Consistency-based Multiple Alignment of Amino Acid Sequences"
HOMEPAGE="http://probcons.stanford.edu/"
SRC_URI="http://probcons.stanford.edu/${MY_P}.tar.gz"
LICENSE="public-domain"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE=""
# Gnuplot is explicitly runtime-only, it's run using system()
RDEPEND="sci-visualization/gnuplot"
DEPEND=""
S="${WORKDIR}/${PN}"
src_unpack() {
unpack ${A}
epatch "${FILESDIR}"/${P}-cxxflags.patch
epatch "${FILESDIR}"/${P}-ldflags.patch
epatch "${FILESDIR}"/gcc-4.3.patch
}
src_compile() {
emake \
CXX="$(tc-getCXX)" \
OPT_CXXFLAGS="${CXXFLAGS}" \
|| die "make failed"
}
src_install() {
dobin probcons makegnuplot || die "failed to install"
# fixes bug 248333
newbin project project-probcons || die
# Overlap with imagemagick
newbin compare compare-probcons || die "failed to install compare"
dodoc README
}
pkg_postinst() {
ewarn "The 'compare' binary is installed as 'compare-probcons'"
ewarn "The 'project' binary is installed as 'project-probcons'"
ewarn "to avoid overlap with other packages."
einfo "You may also want to download the user manual"
einfo "from http://probcons.stanford.edu/manual.pdf"
}
|
GitWeb
