sci-biology/pufferfish/files/pufferfish-do-not-fetch.patch


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diff --git a/CMakeLists.txt b/CMakeLists.txt
index 7f1516a..90f7cdd 100644
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -282,12 +282,9 @@ message("TBB_LIBRARIES = ${TBB_LIBRARIES}")
 
 
 ExternalProject_Add(libseqlib
-GIT_REPOSITORY https://github.com/COMBINE-lab/SeqLib.git
-GIT_TAG        master
 UPDATE_COMMAND ""
 UPDATE_DISCONNECTED 1
 BUILD_IN_SOURCE TRUE
-DOWNLOAD_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/seqlib
 SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/seqlib
 INSTALL_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/install
 CONFIGURE_COMMAND ./configure 
@@ -300,13 +297,10 @@ INSTALL_COMMAND   mkdir -p <INSTALL_DIR>/lib && mkdir -p <INSTALL_DIR>/include &
 )
 
 ExternalProject_Add(libSetCover
-        GIT_REPOSITORY https://github.com/martin-steinegger/setcover.git
-        GIT_TAG        master
         UPDATE_COMMAND ""
         CONFIGURE_COMMAND ""
         UPDATE_DISCONNECTED 1
         BUILD_IN_SOURCE TRUE
-        DOWNLOAD_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/setcover
         SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/setcover
         INSTALL_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/install
         BUILD_COMMAND     make -j8