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# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
LZ4_COMMIT="b3692db46d2b23a7c0af2d5e69988c94f126e10a"
DESCRIPTION="Parallell process SAM/BAM/CRAM files faster than samtools"
HOMEPAGE="https://lomereiter.github.io/sambamba/"
SRC_URI="https://github.com/lomereiter/sambamba/archive/v${PV}.tar.gz -> ${P}.tar.gz
https://github.com/lz4/lz4/archive/${LZ4_COMMIT}.tar.gz -> lz4-${P}.tar.gz"
LICENSE="GPL-2+"
SLOT="0"
KEYWORDS=""
IUSE="debug"
# https://github.com/ldc-developers/gentoo-overlay/tree/master/dev-lang/ldc2
#
# contains bundled htslib
DEPEND=""
RDEPEND="${DEPEND}"
src_unpack() {
default
rm -r "${S}/lz4" || die
mv "${WORKDIR}/lz4-${LZ4_COMMIT}" "${S}/lz4" || die
}
src_compile(){
if use debug ; then
emake debug all
else
emake all
fi
}
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