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# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
EAPI=5
DESCRIPTION="Trim multimers of various primers/adapter from Illumina datasets"
HOMEPAGE="http://genome.gsc.riken.jp/osc/english/dataresource"
SRC_URI="http://genome.gsc.riken.jp/osc/english/software/src/tagdust.tgz"
LICENSE="GPL-3"
SLOT="0"
KEYWORDS="~amd64"
IUSE=""
DEPEND=""
RDEPEND="${DEPEND}"
S="${WORKDIR}"/tagdust
src_prepare(){
sed -e "s/^CFLAGS/#CFLAGS/" -e "s#/usr/local/bin#\$(DESTDIR)/usr/bin#" \
-e "s#/usr/share/man/#\$(DESTDIR)/usr/share/man/#" -i Makefile
}
src_install(){
doman tagdust.1
dobin tagdust
insinto /usr/share/tagdust/Illumina
doins "test/"solexa*.fa
insinto /usr/share/tagdust
doins "test/"protocol.txt README
}
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