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# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
EAPI=5
inherit java-pkg-2
[ "$PV" == "9999" ] && inherit git-r3
DESCRIPTION="GUI for Velvet de novo assembler"
HOMEPAGE="http://www.vicbioinformatics.com/software.vague.shtml"
if [ "$PV" == "9999" ]; then
EGIT_REPO_URI="https://github.com/Victorian-Bioinformatics-Consortium/vague"
KEYWORDS=""
else
SRC_URI="http://www.vicbioinformatics.com/vague-${PV}.tar.gz"
KEYWORDS="~amd64"
fi
LICENSE="GPL-2"
SLOT="0"
RDEPEND="
>=virtual/jre-1.5:*
sci-biology/velvet
sci-biology/velvetk"
DEPEND=">=virtual/jdk-1.5:*"
S="${WORKDIR}"/vague-${PV}
src_prepare(){
epatch "${FILESDIR}"/vague.patch
}
src_install(){
dobin vague
java-pkg_dojar vague.jar
}
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