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# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
inherit autotools eutils
MY_S_PV=${PV}-${PR}
MY_S_P=${PN}-${MY_S_PV}
MY_PV=${PV}
MY_P=${PN}-${MY_PV}
DESCRIPTION="Crystallographic Object-Oriented Toolkit for model building, completion and validation"
HOMEPAGE="http://www.biop.ox.ac.uk/coot/"
if [[ ${MY_PV} = *pre* ]]; then
SRC_URI="http://www.biop.ox.ac.uk/coot/software/source/pre-releases/${MY_S_P}.tar.gz"
else
SRC_URI="http://www.biop.ox.ac.uk/coot/software/source/releases/${MY_P}.tar.gz"
fi
LICENSE="GPL-3"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE=""
RDEPEND=">=sci-libs/gsl-1.3
>=x11-libs/gtk+-2.2
gnome-base/libgnomecanvas
=x11-libs/guile-gtk-2.1
x11-libs/gtkglext
virtual/glut
virtual/opengl
dev-lang/python
dev-scheme/guile-gui
dev-scheme/net-http
dev-scheme/goosh
dev-scheme/guile-www
>=dev-scheme/guile-lib-0.1.6
sci-libs/coot-data
sci-chemistry/reduce
sci-chemistry/refmac
sci-chemistry/probe
>=sci-libs/ccp4-libs-6.1
>=sci-libs/clipper-20090210
dev-python/pygtk
gnome-base/librsvg
>=dev-libs/gmp-4.2.2-r2"
DEPEND="${RDEPEND}
dev-lang/swig"
S="${WORKDIR}/${MY_P}"
src_unpack() {
unpack ${A}
cd "${S}"
# To send upstream
epatch "${FILESDIR}"/${PV}-gcc-4.3.patch
epatch "${FILESDIR}"/${PV}-gcc-4.4.patch
epatch "${FILESDIR}"/${PV}-as-needed.patch
epatch "${FILESDIR}"/link-against-guile-gtk-properly.patch
epatch "${FILESDIR}"/fix-namespace-error.patch
# Link against single-precision fftw
sed -i \
-e "s:lfftw:lsfftw:g" \
-e "s:lrfftw:lsrfftw:g" \
"${S}"/macros/clipper.m4
# Fix where it looks for some binaries
sed -i \
-e "s:/y/people/emsley/coot/Linux/bin/probe.2.11.050121.linux.RH9:/usr/bin/probe:g" \
-e "s:/y/people/emsley/coot/Linux/bin/reduce.2.21.030604:/usr/bin/reduce:g" \
"${S}"/scheme/group-settings.scm
# Look for clipper slotted with '-2' suffix
# sed -i \
# -e "s~\(-lclipper[[:alnum:]-]*\)~\1-2~g" \
# "${S}"/macros/clipper.m4 \
# || die "sed to find -2 slotted libraries failed"
# grep 'include.*clipper' -rl . \
# | xargs sed -i \
# -e "s~\(include.*clipper\)/~\1-2/~g" \
# || die "sed to find -2 slotted headers failed"
# So we don't need to depend on crazy old gtk and friends
cp "${FILESDIR}"/*.m4 "${S}"/macros/
cd "${S}"
eautoreconf
}
src_compile() {
# All the --with's are used to activate various parts.
# Yes, this is broken behavior.
econf \
--includedir='${prefix}/include/coot' \
--with-gtkcanvas-prefix=/usr \
--with-clipper-prefix=/usr \
--with-mmdb-prefix=/usr \
--with-ssmlib-prefix=/usr \
--with-guile \
--with-python=/usr \
--with-guile-gtk \
--with-gtk2 \
--with-pygtk \
|| die "econf failed"
# Regenerate wrappers, otherwise at least gtk-2 build fails
pushd src
rm -f coot_wrap_python.cc coot_wrap_python_pre.cc \
&& emake coot_wrap_python.cc \
|| die "failed to regenerate python wrapper"
rm -f coot_wrap_guile.cc coot_wrap_guile_pre.cc \
&& emake coot_wrap_guile.cc \
||die "failed to regenerate guile wrapper"
popd
emake || die "emake failed"
}
src_install() {
emake DESTDIR="${D}" install || die "install failed"
# Install misses this
insinto /usr/share/coot/python
doins "${S}"/src/coot.py
}
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