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# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
EAPI="2"
inherit autotools base versionator subversion
MY_S2_PV=$(replace_version_separator 2 - ${PV})
MY_S2_P=${PN}-${MY_S2_PV/pre1/pre-1}
MY_S_P=${MY_S2_P}-${PR/r/revision-}
MY_PV=${PV}
MY_P=${PN}-${MY_PV}
ESVN_REPO_URI="http://coot.googlecode.com/svn/trunk"
DESCRIPTION="Crystallographic Object-Oriented Toolkit for model building, completion and validation"
HOMEPAGE="http://www.biop.ox.ac.uk/coot/"
SRC_URI="test? ( http://www.biop.ox.ac.uk/coot/devel/greg-data.tar.gz )"
SLOT="0"
LICENSE="GPL-3"
KEYWORDS="~amd64 ~x86"
IUSE="test"
SCIDEPS="
>=sci-libs/ccp4-libs-6.1
>=sci-libs/clipper-20090520
>=sci-libs/coot-data-2
>=sci-libs/gsl-1.3
sci-chemistry/reduce
sci-chemistry/refmac
sci-chemistry/probe"
XDEPS="
gnome-base/libgnomecanvas
gnome-base/librsvg
virtual/glut
>=x11-libs/gtk+-2.2
x11-libs/gtkglext"
SCHEMEDEPS="
dev-scheme/net-http
dev-scheme/goosh
dev-scheme/guile-gui
>=dev-scheme/guile-lib-0.1.6
dev-scheme/guile-www
=x11-libs/guile-gtk-2.1"
RDEPEND="
${SCIDEPS}
${XDEPS}
${SCHEMEDEPS}
dev-python/pygtk
>=dev-libs/gmp-4.2.2-r2"
DEPEND="${RDEPEND}
dev-lang/swig
test? ( dev-scheme/greg )"
S="${WORKDIR}"
PATCHES=(
"${FILESDIR}"/${PV}-rappermc.patch
"${FILESDIR}"/link-against-guile-gtk-properly.patch
"${FILESDIR}"/fix-namespace-error.patch
)
src_unpack() {
subversion_src_unpack
use test && unpack ${A}
}
src_prepare() {
base_src_prepare
# Link against single-precision fftw
sed -i \
-e "s:lfftw:lsfftw:g" \
-e "s:lrfftw:lsrfftw:g" \
"${S}"/macros/clipper.m4
# So we don't need to depend on crazy old gtk and friends
cp "${FILESDIR}"/*.m4 "${S}"/macros/
cat >> src/svn-revision.cc <<- EOF
extern "C" {
int svn_revision() {
return ${ESVN_WC_REVISION};
}
}
EOF
eautoreconf
}
src_configure() {
# All the --with's are used to activate various parts.
# Yes, this is broken behavior.
econf \
--includedir='${prefix}/include/coot' \
--with-gtkcanvas-prefix=/usr \
--with-clipper-prefix=/usr \
--with-mmdb-prefix=/usr \
--with-ssmlib-prefix=/usr \
--with-gtkgl-prefix=/usr \
--with-guile \
--with-python=/usr \
--with-guile-gtk \
--with-gtk2 \
--with-pygtk \
|| die "econf failed"
}
src_compile() {
# # Regenerate wrappers, otherwise at least gtk-2 build fails
# pushd src
# rm -f coot_wrap_python.cc coot_wrap_python_pre.cc \
# && emake coot_wrap_python.cc \
# || die "failed to regenerate python wrapper"
#
# rm -f coot_wrap_guile.cc coot_wrap_guile_pre.cc \
# && emake coot_wrap_guile.cc \
# ||die "failed to regenerate guile wrapper"
# popd
#
emake || die "emake failed"
cp "${S}"/src/coot.py python/ || die
}
src_test() {
# emake check || die
mkdir "${T}"/coot_test
export COOT_STANDARD_RESIDUES="${S}/standard-residues.pdb"
export COOT_SCHEME_DIR="${S}/scheme/"
export COOT_RESOURCES_FILE="${S}/cootrc"
export COOT_PIXMAPS_DIR="${S}/pixmaps"
export COOT_DATA_DIR="${S}"
export COOT_PYTHON_DIR="${S}/python"
export PYTHONPATH="${COOT_PYTHON_DIR}:${PYTHONPATH}"
export PYTHONHOME=/usr
export CCP4_SCR="${T}"/coot_test
export COOT_TEST_DATA_DIR="${S}"/data/greg-data
cat > command-line-greg.scm <<- EOF
(use-modules (ice-9 greg))
(set! greg-tools (list "greg-tests"))
(set! greg-debug #t)
(set! greg-verbose 5)
(let ((r (greg-test-run)))
(if r
(coot-real-exit 0)
(coot-real-exit 1)))
EOF
einfo "Running test with following paths ..."
einfo "COOT_STANDARD_RESIDUES $COOT_STANDARD_RESIDUES"
einfo "COOT_SCHEME_DIR $COOT_SCHEME_DIR"
einfo "COOT_RESOURCES_FILE $COOT_RESOURCES_FILE"
einfo "COOT_PIXMAPS_DIR $COOT_PIXMAPS_DIR"
einfo "COOT_DATA_DIR $COOT_DATA_DIR"
einfo "COOT_PYTHON_DIR $COOT_PYTHON_DIR"
einfo "PYTHONPATH $PYTHONPATH"
einfo "PYTHONHOME $PYTHONHOME"
einfo "CCP4_SCR ${CCP4_SCR}"
"${S}"/src/coot-real --no-graphics --script command-line-greg.scm || die
}
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