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# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
EAPI=5
inherit java-pkg-opt-2
DESCRIPTION="Prediction of Protein Structural Motifs from NMR Chemical Shifts"
HOMEPAGE="http://spin.niddk.nih.gov/bax/software/MICS/"
SRC_URI="http://spin.niddk.nih.gov/bax/software/MICS/mics.tar.Z -> ${P}.tgz"
SLOT="0"
LICENSE="all-rights-reserved"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="examples"
RDEPEND=">=virtual/jre-1.5"
DEPEND="${RDEPEND}"
S="${WORKDIR}"/MICS
QA_PREBUILT="/opt/.*"
src_prepare() {
rm -f bin/MICS.{mac,static.*,exe} || die
}
src_install() {
local MICS="/opt/${PN}"
exeinto /opt/bin
newexe bin/MICS* ${PN}
insinto ${MICS}
doins -r tab
java-pkg_jarinto ${MICS}
java-pkg_dojar bin/rama.jar
java-pkg_dolauncher jrama+ --jar rama.jar -into /opt/
if use examples; then
insinto /usr/share/${PN}
doins -r demo
fi
cat >> "${T}"/40MICS <<- EOF
MICS_DIR="${EPREFIX}/${MICS}"
EOF
doenvd "${T}"/40MICS
}
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