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# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
inherit eutils python
MY_PV="${PV/./v}"
LICENSE="modeller"
KEYWORDS="~amd64 ~x86"
DESCRIPTION="MODELLER is used for homology or comparative modeling of protein three-dimensional structures"
SRC_URI="http://salilab.org/${PN}/${MY_PV}/${PN}-${MY_PV}.tar.gz"
HOMEPAGE="http://salilab.org/modeller/"
IUSE=""
RESTRICT="mirror"
SLOT="0"
RDEPEND=">=dev-lang/python-2.4"
DEPEND=""
src_install(){
python_version
VER=9v4
case ${ARCH} in
x86) EXECUTABLE_TYPE="i386-intel8";;
amd64) EXECUTABLE_TYPE="x86_64-intel8";;
*) ewarn "Your arch "${ARCH}" does not appear supported at this time."||\
die "Unsupported Arch";;
esac
IN_PATH=/opt/modeller${VER}
sed -e "s:EXECUTABLE_TYPE${VER}=xxx:EXECUTABLE_TYPE${VER}=${EXECUTABLE_TYPE}:g" \
-e "s:MODINSTALL${VER}=xxx:MODINSTALL${VER}=\"${IN_PATH}\":g" \
modeller-${VER}/bin/modscript > "${T}/mod${VER}"
exeinto ${IN_PATH}/bin/
doexe "${T}/mod${VER}"
dosym ${IN_PATH}/bin/mod${VER} /opt/bin/mod${VER}
sed -e "s;@TOPDIR\@;\"${IN_PATH}\";" \
-e "s;@EXETYPE\@;$EXECUTABLE_TYPE;" \
modeller-${VER}/bin/modpy.sh.in > "${T}/modpy.sh"
doexe "${T}/modpy.sh"
insinto ${IN_PATH}/bin/
doins -r modeller-${VER}/bin/{*top,lib}
exeinto ${IN_PATH}/bin/
doexe modeller-${VER}/bin/{modslave.py,mod${VER}_${EXECUTABLE_TYPE}}
exeinto /usr/lib/python${PYVER}/site-packages/
doexe modeller-${VER}/lib/${EXECUTABLE_TYPE}/_modeller.so
dosym ${IN_PATH}/modlib/modeller /usr/lib/python${PYVER}/site-packages/modeller
dosym ${IN_PATH}/lib/${EXECUTABLE_TYPE}/_modeller.so\
/usr/lib/python${PYVER}/site-packages/_modeller.so
exeinto ${IN_PATH}/lib/${EXECUTABLE_TYPE}/
doexe modeller-${VER}/lib/${EXECUTABLE_TYPE}/{lib*,_modeller.so}
exeinto ${IN_PATH}/lib/${EXECUTABLE_TYPE}/python${PYVER}/
doexe modeller-${VER}/lib/${EXECUTABLE_TYPE}/python2.5/_modeller.so
dosym ${IN_PATH}/lib/${EXECUTABLE_TYPE}/libmodeller.so.1 \
${IN_PATH}/lib/${EXECUTABLE_TYPE}/libmodeller.so
insinto ${IN_PATH}/modlib/
doins -r modeller-${VER}/modlib/{*mat,*lib,*prob,*mdt,*bin,*de,*inp,*ini,modeller}
insinto ${IN_PATH}/
doins -r modeller-${VER}/src
insinto /usr/share/${PN}/
doins -r modeller-${VER}/examples
dohtml modeller-${VER}/doc/*
dodoc modeller-${VER}/{README,ChangeLog}
cat >> "${T}/config.py" <<- EOF
install_dir = "${IN_PATH}/"
license = "YOURLICENSEKEY"
EOF
insinto ${IN_PATH}/modlib/modeller/
doins "${T}/config.py"
}
pkg_postinst(){
#Adapted from BUG #127628
einfo ""
einfo " If you need to define your own residues"
einfo " read the FAQ and edit the following files:"
einfo ""
einfo " ${MY_D}/modlib/top_heav.lib"
einfo " ${MY_D}/modlib/radii.lib"
einfo " ${MY_D}/modlib/radii14.lib"
einfo " ${MY_D}/modlib/restyp.lib"
einfo ""
einfo " Good Luck and Happy Modeling :D"
einfo ""
echo
echo
ewarn "Obtain a license Key from"
ewarn "http://salilab.org/modeller/registration.html"
ewarn "and change the appropriate line in"
ewarn "${IN_PATH}/modlib/modeller/config.py"
}
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