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|
#!/bin/bash
source /etc/init.d/functions.sh
#[ -f /etc/empi.conf ] && source /etc/empi.conf
MPI_IMPS="openmpi lam-mpi"
MPI_ALL_IMPS="mpich mpich2 openmpi lam-mpi"
VERBOSE=0
[[ -z ${MPI_PORTDIR} ]] \
&& MPI_PORTDIR="$(portageq portdir_overlay)" \
&& MPI_PORTDIR="${MPI_PORTDIR%% *}" \
[[ -z ${COMPILER} ]] && COMPILER=gcc
# imp (category) Implementation we're installing for. mpi-*
# targets Packages to run action on. When creating, the implementation to use.
# action create, add, update, remove.
die(){
if [ -n "${1}" ]; then
echo; eerror $1; echo
fi
exit 1
}
usage(){
local rc=${1:-0}
shift
cat <<-EOF
Usage: ${HILITE}empi${NORMAL} ${GOOD}[options]${NORMAL} ${BRACKET}--implementation IMPLEMENTATION pkgspec${NORMAL}
Options:
${GOOD}-c, --create${NORMAL} (Re)Initialize setup for implementation.
${GOOD}-a, --add${NORMAL} pkgspec(s) Add packages using specified implementation.
${GOOD}-i, --implementation${NORMAL} imp Implementation to use.
${GOOD}-l, --list${NORMAL} List installed implementations.
${GOOD}-t, --tree${NORMAL} path Path to portage tree to use ebuilds from.
${GOOD}-d, --delete${NORMAL} imp Remove everything related to specified implementation.
pkgspec is specified by a package string. Without a version, the best_visible is used.
openmpi, sys-cluster/openmpi, =sys-cluster/openmpi-1.2.5
implementation (-i) is user defined but must be prefixed with "mpi-"
EOF
[[ -n $* ]] && echo && eerror "Error: $*"
exit ${rc}
}
imp_is_valid() {
[[ -z ${imp} ]] && usage 1 "No implementation defined."
[[ ${imp} != mpi-* ]] && usage 1 "Implementations must be prefixed with mpi-"
[[ ${imp//./} != ${imp} ]] && usage 1 "Implementations cannot contain . (period)"
}
is_imp_category() {
local i
for i in $(eselect mpi list -p); do
[[ ${1} == ${i} ]] && return 0
done
return 1
}
split_atom() {
local cpv c pf pn pv
cpv=$(portageq best_visible / ${1})
if [[ -z ${cpv} || ${rc} -ne 0 ]]; then
cpv=$(portageq best_visible / =${1})
[[ -z ${cpv} || ${rc} -ne 0 ]] && return 1
fi
c=${cpv%/*}; pf=${cpv#${c}/}; pn=${pf%%-[0-9]*}; pv=${pf#${pn}-}
echo "${c} ${pn} ${pv}"
}
parse_pkgspecs() {
local atom i
for ((i=0; i<${#targets[@]}; i++)); do
atom=($(split_atom ${targets[i]}))
if [[ $? -ne 0 ]]; then
eerror "Unable to find a unique package or valid version for ${targets[i]}"
eerror "Is the package unmasked and unblocked normally?"
die ""
fi
targets[i]=${atom[0]}/${atom[1]}-${atom[2]}
done
}
# handle_etc_portage package_spec
# parses /etc/portage/package.{keywords,use}. If ${imp}/${pn} is seen, we don't
# do a thing. Otherwise copy any lines that have ${cat}/${pn} inserting them again
# with the new category.
handle_etc_portage() {
local atom=( $(split_atom ${1}) )
local ext line gfiles f
for ext in "keywords" "use"; do
if [ -d /etc/portage/package.${ext} ]; then
gfiles="/etc/portage/package.${ext}/*"
f=/etc/portage/package.${ext}/${imp}
else
gfiles="/etc/portage/package.${ext}"
f=/etc/portage/package.${ext}
fi
if ! grep "[>=<]*${imp}/${atom[1]}" ${gfiles} &>/dev/null; then
grep "[>=<]*${atom[0]}/${atom[1]}" ${gfiles} \
| sed "s,${atom[0]},${imp}," \
| while read line; do
echo "${line}" >> ${f}
[[ ${VERBOSE} -ne 0 ]] \
&& einfo "Addition to ${f}: ${line}"
done
elif [[ ${VERBOSE} -ne 0 ]]; then
ewarn "Keys for ${imp}/${atom[1]} already exist in ${f}. Will not replicate them."
fi
done
}
get_ebuild_dir() {
local d a
local want_uses_mpi=${2:-0}
local found=0
a=($(split_atom ${1}))
[[ $? -ne 0 ]] && die "Unable to find a unique package or valid version for ${1}."
is_imp_category ${a[0]} && die "It makes no sense to build a new mpi-implementation from a current one."
if [[ -z ${portage_tree} ]]; then
for d in $(portageq portdir_overlay) $(portageq portdir); do
if [[ ${want_uses_mpi} -ne 0 ]]; then
[[ -f "${d}/${a[0]}/${a[1]}/${a[1]}-${a[2]}.ebuild" ]] \
&& ebuild_uses_mpi ${d}/${a[0]}/${a[1]} ${a[1]}-${a[2]} \
&& found=1
else
[[ -f "${d}/${a[0]}/${a[1]}/${a[1]}-${a[2]}.ebuild" ]] && found=1
fi
[[ ${found} -ne 0 ]] && break
done
if [[ ${found} -ne 0 ]]; then
portage_tree=${d}
else
die "Could not find an ebuild for ${a[0]}/${a[1]}-${a[2]}."
fi
fi
ebuild_dir="${portage_tree}/${a[0]}/${a[1]}"
}
ebuild_uses_mpi() {
grep 'inherit .*mpi' "${1}/${2##*/}.ebuild" &>/dev/null
}
setup_portage_vars() {
export PORTDIR_OVERLAY="${MPI_PORTDIR} $(portageq portdir_overlay)"
export PKGDIR="$(portageq envvar PKGDIR)/mpi/${imp}"
}
link_ebuild_dir() {
ln -snf "${ebuild_dir}" "${MPI_PORTDIR}"/${imp}/${ebuild_dir##*/} \
|| die "Failed to link ${ebuild_dir} to ${MPI_PORTDIR}/${imp}/${ebuild_dir##*/}"
}
do_emerge() {
ebegin "Emerging $*"
setup_portage_vars
emerge ${emerge_opts} $* || die "emerge failed!"
eend
}
# We should have only one target here.
create_implementation() {
local mpi_imp_pkg d mpi_imp_pn
[[ ${#targets[@]} -ne 1 ]] && die "Can only create one implementation at a time."
# Prevent laziness
[[ ${targets[0]} == ${targets[0]##*/} ]] \
&& targets[0]="sys-cluster/${targets[0]}"
parse_pkgspecs
get_ebuild_dir ${targets[0]} 1
mpi_imp_pn=${ebuild_dir##*/}
mpi_imp_pkg=${targets[0]}
handle_etc_portage ${targets[0]}
targets[0]="=${imp}/${targets[0]##*/}"
# Refuse to break systems. If there is already an implementation
# installed in that directory, we're not going to add another one as
# the eclass doesn't fix one problem just to introduce a bigger one.
for d in $(find ${MPI_PORTDIR}/${imp} -maxdepth 1 -mindepth 1 -type l);do
d=${d##*/}
[[ ${d} == ${mpi_imp_pn} ]] && continue
for i in ${MPI_ALL_IMPS}; do
[[ ${i} == ${d} ]] \
&& die "${imp} already has MPI implementation ${d}, refusing to add ${mpi_imp_pn}"
done
done
if [[ -d "${MPI_PORTDIR}"/${imp} ]]; then
[[ ${VERBOSE} -ne 0 ]] && ewarn "${imp} has already been created."
else
mkdir -p ${MPI_PORTDIR}/${imp}
link_ebuild_dir
fi
if ! grep "^${imp}$" /etc/portage/categories &>/dev/null; then
echo "${imp}" >> /etc/portage/categories
fi
cat << EOF
Creating ${HILITE}${imp}${NORMAL}
Implementation: ${GOOD}${imp}${NORMAL}
MPI Package: ${GOOD}${mpi_imp_pkg}${NORMAL}
Source: ${GOOD}${ebuild_dir}${NORMAL}
Destination: ${GOOD}${MPI_PORTDIR}/${imp}${NORMAL}
EOF
do_emerge ${targets[0]}
}
add_packages(){
local i j deps
[[ -d "${MPI_PORTDIR}"/${imp} ]] || die "Implementation ${imp} has not been created yet."
[[ ${#targets[@]} -lt 1 ]] && die "You need to specify at least one package"
parse_pkgspecs
for ((i=0;i<${#targets[@]};i++)); do
get_ebuild_dir ${targets[i]}
if ebuild_uses_mpi ${ebuild_dir} ${targets[i]}; then
link_ebuild_dir
handle_etc_portage ${targets[i]}
targets[i]="=${imp}/${targets[i]##*/}"
else
targets[i]="=${targets[i]}"
fi
# I don't know about this, but do you have a better idea?
deps="$(emerge --color=n --onlydeps -p --quiet ${targets[i]})"
if [[ $? -ne 0 ]]; then
emerge --onlydeps -p ${targets[i]}
die "Unable to calculate deps for ${targets[i]}"
fi
deps=( $(echo ${deps} | sed -e 's:\[[a-z]* [A-Z] \] :=:g') )
for ((j=0;j<${#deps[@]};j++)); do
get_ebuild_dir ${deps[j]}
if ebuild_uses_mpi ${deps[i]}; then
link_ebuild_dir
fi
done
done
cat << EOF
Adding packages to ${HILIGHT}${imp}${NORMAL}
Packages: ${GOOD}${targets[@]}${NORMAL}
EOF
do_emerge ${targets[@]}
}
delete_implementation() {
local pkgs=( $(ls /var/db/pkg/${imp}/) )
local ext d i
[[ -d "${MPI_PORTDIR}"/${imp} ]] || die "Implementation ${imp} has not been created yet."
for (( i=0; i<${#pkgs[@]}; i++)); do
pkgs[i]="=${imp}/${pkgs[i]}"
done
if ! emerge -C ${emerge_opts/-u/} ${pkgs[@]}; then
die "Failed to unmerge ${pkgs[@]}"
fi
for ext in "keywords" "use"; do
if [ -d /etc/portage/package.${ext} ]; then
rm /etc/portage/package.${ext}/${imp} &>/dev/null
else
sed -i -e "/${imp}\//d" /etc/portage/package.${ext}
fi
done
sed -i -e "/^${imp}$/d" /etc/portage/categories
for d in $(ls "${MPI_PORTDIR}"/${imp}/); do
rm "${MPI_PORTDIR}"/${imp}/${d}
done
rmdir "${MPI_PORTDIR}"/${imp}
rmdir /var/db/pkg/${imp}
}
[[ ${UID} -ne 0 ]] && die "You must be root."
targets=""
emerge_opts="-u -a -v"
portage_tree=""
action=""
while [[ $# -gt 0 ]]; do
case $1 in
-h|--help)
usage;;
-c|--create)
action="${action}create";;
-a|--add)
action="${action}add";;
-d|--delete)
action="${action}delete"
shift; imp=${1};;
-i|--implementation)
shift; imp=${1};;
-t|--tree)
shift; portage_tree=${1};;
-v|--verbose)
VERBOSE=1;;
-*)
emerge_opts="${emerge_opts} ${1}";;
*)
targets=( $(echo ${targets[@]}) ${1} );;
esac
shift
done
[[ -z ${action} ]] && usage 1 "No action defined."
[[ -z ${imp} ]] && usage 1 "No implementation defined."
imp_is_valid
[[ ${action} == *create* ]] && create_implementation
[[ ${action} == *add* ]] && add_packages
[[ ${action} == *delete* ]] && delete_implementation
|