diff options
Diffstat (limited to 'sci-biology/clover')
| -rw-r--r-- | sci-biology/clover/ChangeLog | 3 | ||||
| -rw-r--r-- | sci-biology/clover/Manifest | 16 | ||||
| -rw-r--r-- | sci-biology/clover/clover-2006.07.17.ebuild | 22 |
3 files changed, 16 insertions, 25 deletions
diff --git a/sci-biology/clover/ChangeLog b/sci-biology/clover/ChangeLog index 45e17d614..f99df3cc5 100644 --- a/sci-biology/clover/ChangeLog +++ b/sci-biology/clover/ChangeLog @@ -2,6 +2,9 @@ # Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ + 30 Jun 2007; Jakub Moc <jakub@gentoo.org> clover-2006.07.17.ebuild: + einfo -> elog; cosmetics + 15 Mar 2007; AK <gentoo@horizon.ath.cx> +clover-2006.07.17.ebuild, +metadata.xml: new package (bug 142269) diff --git a/sci-biology/clover/Manifest b/sci-biology/clover/Manifest index 355782c14..38fae3785 100644 --- a/sci-biology/clover/Manifest +++ b/sci-biology/clover/Manifest @@ -1,17 +1,5 @@ DIST clover-2006-07-17.tar.gz 15610 RMD160 e7f5c2b53afef2df292f9274b2a1ce2c1fbbc0c3 SHA1 f80b528ceb9833d0465b1196ae793c5364a87109 SHA256 e7b5b9fa8a341d49d9cf79a6d03ef0677a493f0c34a9a2f466a864575af91cb9 DIST jaspar2005core 14913 RMD160 6fe43472cc1a2e0389ad9290801db56488773d3e SHA1 be8cdff62cf35f430c0c17f53564529b08000c9c SHA256 498a560c67411789106b50ccdfd9bc41f571d77c2fe9bfba7e95128c0a122fe4 -EBUILD clover-2006.07.17.ebuild 1059 RMD160 968519d9c6c17d29102ae9b6465acfe3812bcae7 SHA1 873e0f380eac7567ef3c2f9ee29fbc619a31fc4f SHA256 0ed8a75004280210ccd56dfb5c510bca400ece76cddbe3728ea3674f52387bd6 -MD5 1509c4396358a7c57ced969757f1eb1e clover-2006.07.17.ebuild 1059 -RMD160 968519d9c6c17d29102ae9b6465acfe3812bcae7 clover-2006.07.17.ebuild 1059 -SHA256 0ed8a75004280210ccd56dfb5c510bca400ece76cddbe3728ea3674f52387bd6 clover-2006.07.17.ebuild 1059 -MISC ChangeLog 233 RMD160 57d369f4ef428cbe77d625e89c21167ef0519166 SHA1 d7a9958d9523c9c5134e2f4b3196a114c4e0c599 SHA256 9e2831ba3cdc43db68aafa656f9b533aa4a5d3c81d8bd71438135ade7a799293 -MD5 7ffea1525a9a4b528e3b2debc5c5f8d3 ChangeLog 233 -RMD160 57d369f4ef428cbe77d625e89c21167ef0519166 ChangeLog 233 -SHA256 9e2831ba3cdc43db68aafa656f9b533aa4a5d3c81d8bd71438135ade7a799293 ChangeLog 233 +EBUILD clover-2006.07.17.ebuild 1046 RMD160 abf81b8f5d55372c1416ad24a89c214fec6c7b21 SHA1 a11311a3231b6a6ae83bccb31fab159d8cfece85 SHA256 49a511751b5492384985df3a40ee28bbd316799fa01345ead6f29ee87a86560e +MISC ChangeLog 331 RMD160 c2d65a58bb342c00f31063c9c687aae09ede1e02 SHA1 9535d6a1cfafbb4b431647f507977a6f6fa3a4d2 SHA256 8016ea7b5bbba73c074d43ee62826f750539fd40f1fb7dc874c44175c1500e97 MISC metadata.xml 170 RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 SHA1 ac7f48a14fec325926f9ce1be8fbf1f311b4f2e4 SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42 -MD5 1e678929a9fec6632e227bdf2262e9a1 metadata.xml 170 -RMD160 645927a396fdc21cdeb089fe42c5397332420ea6 metadata.xml 170 -SHA256 d797a2ec6f9dc516c9f9c1a758ee87ad3e8c43101b5dc76c2f872d5bd4639b42 metadata.xml 170 -MD5 2fd761a79ad477d120b354d1a5a9baab files/digest-clover-2006.07.17 470 -RMD160 19c7bb7d36860924f2b707673290c6dd8e2d7a3a files/digest-clover-2006.07.17 470 -SHA256 d95bafedeabe12831000becf898ee985b95ff83e269e3d5ee39506fe1287a0d4 files/digest-clover-2006.07.17 470 diff --git a/sci-biology/clover/clover-2006.07.17.ebuild b/sci-biology/clover/clover-2006.07.17.ebuild index 4cf143b0f..d86b96e85 100644 --- a/sci-biology/clover/clover-2006.07.17.ebuild +++ b/sci-biology/clover/clover-2006.07.17.ebuild @@ -5,10 +5,11 @@ inherit versionator toolchain-funcs MY_PV=$(replace_all_version_separators '-') - +MY_P="${PN}-${MY_PV}" DESCRIPTION="Cis-eLement OVERrepresentation: Detection of functional DNA motifs" HOMEPAGE="http://zlab.bu.edu/clover/" -SRC_URI="http://zlab.bu.edu/~mfrith/downloads/${PN}-${MY_PV}.tar.gz http://zlab.bu.edu/clover/jaspar2005core" +SRC_URI="http://zlab.bu.edu/~mfrith/downloads/${MY_P}.tar.gz + http://zlab.bu.edu/clover/jaspar2005core" LICENSE="as-is" SLOT="0" @@ -18,26 +19,25 @@ KEYWORDS="~x86" DEPEND="" RDEPEND="" -S="${WORKDIR}/${PN}-${MY_PV}" +S="${WORKDIR}/${MY_P}" src_unpack() { - unpack ${PN}-${MY_PV}.tar.gz + unpack ${MY_P}.tar.gz + sed -i "s:g++:$(tc-getCXX):; s:-Wall -O3:${CFLAGS}:" Makefile || die "sed failed" } src_compile() { - sed -i "s:g++:$(tc-getCXX):; s:-Wall -O3:${CFLAGS}:" Makefile || die "sed failed" emake || die "emake failed" } src_install() { dobin clover - dodir "/usr/share/${PN}" - insinto "/usr/share/${PN}" - doins ${DISTDIR}/jaspar2005core || die + insinto /usr/share/${PN} + doins "${DISTDIR}"/jaspar2005core || die "doins failed" } pkg_postinst() { - einfo "The motif library jaspar2005core has been installed in" - einfo " /usr/share/clover/jaspar2005core" - einfo "You can pass this library to clover for motif search, or use your own library." + elog "The motif library jaspar2005core has been installed in" + elog " /usr/share/clover/jaspar2005core" + elog "You can pass this library to clover for motif search, or use your own library." } |