dev-python/montage-wrapper: Initial import

Package-Manager: portage-2.3.0_rc1

3 files changed, 75 insertions, 0 deletions

diff --git a/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-fix_tests.patch b/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-fix_tests.patch
new file mode 100644
index 000000000000..8d611b72f81a
--- /dev/null
+++ b/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-fix_tests.patch
@@ -0,0 +1,40 @@
+Author: Ole Streicher <olebole@debian.org>
+Description: Make sure that opened FITS files are closed after the test
+--- a/montage_wrapper/tests/test_wrappers.py
++++ b/montage_wrapper/tests/test_wrappers.py
+@@ -46,21 +46,21 @@
+ 
+     def test_mosaic(self):
+         mosaic(os.path.join(self.tmpdir, 'raw'),os.path.join(self.tmpdir, 'mosaic'), hdu=0)
+-        hdu = fits.open(os.path.join(self.tmpdir, 'mosaic', 'mosaic.fits'))[0]
+-        assert hdu.data.shape == (288, 282)
+-        valid = hdu.data[~np.isnan(hdu.data)]
+-        assert len(valid) == 65029
+-        assert_allclose(np.std(valid), 0.12658458001333581, 1e-5)
+-        assert_allclose(np.mean(valid), 0.4995945318627074, 1e-5)
+-        assert_allclose(np.median(valid), 0.5003376603126526, 1e-5)
++        with fits.open(os.path.join(self.tmpdir, 'mosaic', 'mosaic.fits')) as hdu:
++            assert hdu[0].data.shape == (288, 282)
++            valid = hdu[0].data[~np.isnan(hdu[0].data)]
++            assert len(valid) == 65029
++            assert_allclose(np.std(valid), 0.12658458001333581, 1e-5)
++            assert_allclose(np.mean(valid), 0.4995945318627074, 1e-5)
++            assert_allclose(np.median(valid), 0.5003376603126526, 1e-5)
+ 
+     @pytest.mark.xfail()  # results are not consistent on different machines
+     def test_mosaic_background_match(self):
+         mosaic(os.path.join(self.tmpdir, 'raw'),os.path.join(self.tmpdir, 'mosaic_bkgmatch'), background_match=True)
+-        hdu = fits.open(os.path.join(self.tmpdir, 'mosaic_bkgmatch', 'mosaic.fits'))[0]
+-        assert hdu.data.shape == (288, 282)
+-        valid = hdu.data[~np.isnan(hdu.data)]
+-        assert len(valid) == 65029
+-        assert_allclose(np.std(valid), 0.12661606622654725)
+-        assert_allclose(np.mean(valid), 0.4994805202294361)
+-        assert_allclose(np.median(valid), 0.5002447366714478)
++        with fits.open(os.path.join(self.tmpdir, 'mosaic_bkgmatch', 'mosaic.fits')) as hdu:
++            assert hdu[0].data.shape == (288, 282)
++            valid = hdu[0].data[~np.isnan(hdu[0].data)]
++            assert len(valid) == 65029
++            assert_allclose(np.std(valid), 0.12661606622654725)
++            assert_allclose(np.mean(valid), 0.4994805202294361)
++            assert_allclose(np.median(valid), 0.5002447366714478)
diff --git a/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-increase_rtol.patch b/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-increase_rtol.patch
new file mode 100644
index 000000000000..285b525a4df5
--- /dev/null
+++ b/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-increase_rtol.patch
@@ -0,0 +1,17 @@
+Author: Ole Streicher <olebole@debian.org>
+Description: Increase rtol of asserts to let the tests succeed with montage-4.0
+--- a/montage_wrapper/tests/test_wrappers.py
++++ b/montage_wrapper/tests/test_wrappers.py
+@@ -50,9 +50,9 @@
+         assert hdu.data.shape == (288, 282)
+         valid = hdu.data[~np.isnan(hdu.data)]
+         assert len(valid) == 65029
+-        assert_allclose(np.std(valid), 0.12658458001333581)
+-        assert_allclose(np.mean(valid), 0.4995945318627074)
+-        assert_allclose(np.median(valid), 0.5003376603126526)
++        assert_allclose(np.std(valid), 0.12658458001333581, 1e-5)
++        assert_allclose(np.mean(valid), 0.4995945318627074, 1e-5)
++        assert_allclose(np.median(valid), 0.5003376603126526, 1e-5)
+ 
+     @pytest.mark.xfail()  # results are not consistent on different machines
+     def test_mosaic_background_match(self):
diff --git a/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-use_configparser.patch b/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-use_configparser.patch
new file mode 100644
index 000000000000..082c3678e125
--- /dev/null
+++ b/dev-python/montage-wrapper/files/montage-wrapper-0.9.8-use_configparser.patch
@@ -0,0 +1,18 @@
+Author: Vincent Prat <vinceprat@free.fr>
+Description: Use ConfigParser module instead of the one embedded in distutils.config
+--- a/setup.py
++++ b/setup.py
+@@ -21,8 +21,11 @@
+ from astropy_helpers.version_helpers import generate_version_py
+ 
+ # Get some values from the setup.cfg
+-from distutils import config
+-conf = config.ConfigParser()
++try:
++    from configparser import ConfigParser
++except:
++    from ConfigParser import ConfigParser
++conf = ConfigParser()
+ conf.read(['setup.cfg'])
+ metadata = dict(conf.items('metadata'))
+