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authorDavid Seifert <soap@gentoo.org>2021-04-05 15:30:39 +0200
committerDavid Seifert <soap@gentoo.org>2021-04-05 15:30:39 +0200
commit25a60dea75866f20058ff6fa723feb9a043ac5d5 (patch)
tree7783f0b4576cbcc2e5c9ea293c47be3a560c97aa /sci-biology/cutg
parentsci-biology/glimmer: Port to EAPI 7 (diff)
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sci-biology/cutg: Port to EAPI 7
Package-Manager: Portage-3.0.18, Repoman-3.0.3 Signed-off-by: David Seifert <soap@gentoo.org>
Diffstat (limited to 'sci-biology/cutg')
-rw-r--r--sci-biology/cutg/cutg-160-r1.ebuild33
1 files changed, 13 insertions, 20 deletions
diff --git a/sci-biology/cutg/cutg-160-r1.ebuild b/sci-biology/cutg/cutg-160-r1.ebuild
index 9a8130969019..97abacaab1e4 100644
--- a/sci-biology/cutg/cutg-160-r1.ebuild
+++ b/sci-biology/cutg/cutg-160-r1.ebuild
@@ -1,49 +1,42 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
+EAPI=7
DESCRIPTION="Codon usage tables calculated from GenBank"
HOMEPAGE="http://www.kazusa.or.jp/codon/"
SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
-SLOT="0"
LICENSE="public-domain"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
# Minimal build keeps only the indexed files (if applicable) and the
# documentation. The non-indexed database is not installed.
IUSE="emboss minimal"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-
-DEPEND="emboss? ( sci-biology/emboss )"
-RDEPEND="${DEPEND}"
-
RESTRICT="binchecks strip"
+RDEPEND="emboss? ( sci-biology/emboss )"
+BDEPEND="${RDEPEND}"
+
src_compile() {
if use emboss; then
mkdir CODONS || die
ebegin "Indexing CUTG for usage with EMBOSS."
- EMBOSS_DATA="." cutgextract -auto -directory "${S}" || die \
- "Indexing CUTG failed."
+ EMBOSS_DATA="." cutgextract -auto -directory "${S}" || die "Indexing CUTG failed"
eend
fi
}
src_install() {
- local file
dodoc README CODON_LABEL SPSUM_LABEL
+
if ! use minimal; then
- dodir /usr/share/${PN}
- mv *.codon *.spsum "${ED}"/usr/share/${PN} || die \
- "Installing raw CUTG database failed."
+ insinto /usr/share/cutg
+ doins *.codon *.spsum
fi
if use emboss; then
- dodir /usr/share/EMBOSS/data/CODONS
- cd CODONS || die
- for file in *; do
- mv ${file} "${ED}"/usr/share/EMBOSS/data/CODONS/ || die \
- "Installing the EMBOSS-indexed database failed."
- done
+ insinto /usr/share/EMBOSS/data
+ doins -r CODONS
fi
}