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authorDavid Seifert <soap@gentoo.org>2017-01-24 17:46:33 +0100
committerDavid Seifert <soap@gentoo.org>2017-01-24 17:46:33 +0100
commit6decdcc1f979feaaf223a2b2e237946d3f0c704c (patch)
tree51d3b7518b9c181c4bf7ad81c3b1abcee1931898 /sci-biology
parentprofiles: Drop kde-plasma/plasma-workspace[prison] stable mask (diff)
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sci-biology/vaal: Remove old
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/vaal/vaal-46233.ebuild42
1 files changed, 0 insertions, 42 deletions
diff --git a/sci-biology/vaal/vaal-46233.ebuild b/sci-biology/vaal/vaal-46233.ebuild
deleted file mode 100644
index 6aee878ad2d1..000000000000
--- a/sci-biology/vaal/vaal-46233.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=5
-
-AUTOTOOLS_AUTORECONF=yes
-
-inherit autotools-utils
-
-DESCRIPTION="A variant ascertainment algorithm that can be used to detect SNPs, indels, and other polymorphisms"
-HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd/"
-SRC_URI="
- ftp://ftp.broad.mit.edu/pub/crd/VAAL/latest_source_code/${P}.tar.gz
- ftp://ftp.broad.mit.edu/pub/crd/VAAL/VAAL_manual.doc"
-
-LICENSE="Whitehead-MIT"
-SLOT="0"
-KEYWORDS="amd64"
-IUSE="openmp"
-
-DEPEND=">=dev-libs/boost-1.41.0-r3"
-RDEPEND="${DEPEND}"
-
-DOCS=( "${DISTDIR}/VAAL_manual.doc" )
-
-src_prepare() {
- sed \
- -e '/COPYING/d' \
- -i src/Makefile.am || die
-
- sed \
- -e 's:-ggdb::g' \
- -e '/AC_OPENMP_CEHCK/d' \
- -i configure.ac || die
- autotools-utils_src_prepare
-}
-
-src_configure(){
- local myeconfargs=( $(use_enable openmp) )
- autotools-utils_src_configure
-}