proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

6 files changed, 192 insertions, 0 deletions

diff --git a/sci-libs/flann/files/flann-1.8.4-CUDA_NVCC_FLAGS.patch b/sci-libs/flann/files/flann-1.8.4-CUDA_NVCC_FLAGS.patch
new file mode 100644
index 000000000000..1a068af28351
--- /dev/null
+++ b/sci-libs/flann/files/flann-1.8.4-CUDA_NVCC_FLAGS.patch
@@ -0,0 +1,16 @@
+ src/cpp/CMakeLists.txt | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/src/cpp/CMakeLists.txt b/src/cpp/CMakeLists.txt
+index 8e72409..a4b35b1 100644
+--- a/src/cpp/CMakeLists.txt
++++ b/src/cpp/CMakeLists.txt
+@@ -15,7 +15,7 @@ endif()
+ set_property(TARGET flann_cpp_s PROPERTY COMPILE_DEFINITIONS FLANN_STATIC FLANN_USE_CUDA)
+ 
+ if (BUILD_CUDA_LIB)
+-    SET(CUDA_NVCC_FLAGS -DFLANN_USE_CUDA)
++    SET(CUDA_NVCC_FLAGS "${CUDA_NVCC_FLAGS};-DFLANN_USE_CUDA")
+     if(CMAKE_COMPILER_IS_GNUCC)
+ 		set(CUDA_NVCC_FLAGS "${CUDA_NVCC_FLAGS};-Xcompiler;-fPIC;-arch=sm_13" )
+         if (NVCC_COMPILER_BINDIR)
diff --git a/sci-libs/flann/files/flann-1.8.4-cuda5.5.patch b/sci-libs/flann/files/flann-1.8.4-cuda5.5.patch
new file mode 100644
index 000000000000..046b3252c36f
--- /dev/null
+++ b/sci-libs/flann/files/flann-1.8.4-cuda5.5.patch
@@ -0,0 +1,61 @@
+ src/cpp/flann/util/cuda/result_set.h | 12 ++++++------
+ 1 file changed, 6 insertions(+), 6 deletions(-)
+
+diff --git a/src/cpp/flann/util/cuda/result_set.h b/src/cpp/flann/util/cuda/result_set.h
+index 9ac8111..324ca1e 100644
+--- a/src/cpp/flann/util/cuda/result_set.h
++++ b/src/cpp/flann/util/cuda/result_set.h
+@@ -54,7 +54,7 @@ struct SingleResultSet
+     DistanceType bestDist;
+     const DistanceType epsError;
+ 
+-    __device__
++    __device__ __host__
+     SingleResultSet( DistanceType eps ) : bestIndex(-1),bestDist(INFINITY), epsError(eps){ }
+ 
+     __device__
+@@ -129,7 +129,7 @@ struct KnnResultSet
+     const DistanceType epsError;
+ 
+ 
+-    __device__
++    __device__ __host__
+     KnnResultSet(int knn, bool sortResults, DistanceType eps) : foundNeighbors(0),largestHeapDist(INFINITY),k(knn), sorted(sortResults), epsError(eps){ }
+ 
+     //          __host__ __device__
+@@ -229,7 +229,7 @@ struct CountingRadiusResultSet
+     DistanceType radius_sq_;
+     int max_neighbors_;
+ 
+-    __device__
++    __device__ __host__
+     CountingRadiusResultSet(DistanceType radius, int max_neighbors) : count_(0),radius_sq_(radius), max_neighbors_(max_neighbors){ }
+ 
+     __device__
+@@ -279,7 +279,7 @@ struct RadiusKnnResultSet
+     //          int count_;
+ 
+ 
+-    __device__
++    __device__ __host__
+     RadiusKnnResultSet(DistanceType radius, int knn, int* segment_starts, bool sortResults) : foundNeighbors(0),largestHeapDist(radius),k(knn), sorted(sortResults), radius_sq_(radius),segment_starts_(segment_starts) { }
+ 
+     //          __host__ __device__
+@@ -381,7 +381,7 @@ struct KnnRadiusResultSet
+     const DistanceType radius_sq;
+ 
+ 
+-    __device__
++    __device__ __host__
+     KnnRadiusResultSet(int knn, bool sortResults, DistanceType eps, DistanceType radius) : foundNeighbors(0),largestHeapDist(radius),k(knn), sorted(sortResults), epsError(eps),radius_sq(radius){ }
+ 
+     //          __host__ __device__
+@@ -484,7 +484,7 @@ struct RadiusResultSet
+     int count_;
+     bool sorted_;
+ 
+-    __device__
++    __device__ __host__
+     RadiusResultSet(DistanceType radius, int* segment_starts, bool sorted) : radius_sq_(radius), segment_starts_(segment_starts), count_(0), sorted_(sorted){ }
+ 
+     __device__
diff --git a/sci-libs/flann/files/flann-1.8.4-docdir.patch b/sci-libs/flann/files/flann-1.8.4-docdir.patch
new file mode 100644
index 000000000000..4b16684de14d
--- /dev/null
+++ b/sci-libs/flann/files/flann-1.8.4-docdir.patch
@@ -0,0 +1,24 @@
+ doc/CMakeLists.txt | 6 +++++-
+ 1 file changed, 5 insertions(+), 1 deletion(-)
+
+diff --git a/doc/CMakeLists.txt b/doc/CMakeLists.txt
+index 2d8eb24..aeac8ed 100644
+--- a/doc/CMakeLists.txt
++++ b/doc/CMakeLists.txt
+@@ -1,4 +1,8 @@
+ find_package(LATEX)
++
++if (NOT DOCDIR)
++  set(DOCDIR share/doc/flann)
++endif ()
+  
+ if (EXISTS ${PDFLATEX_COMPILER} AND EXISTS ${BIBTEX_COMPILER})
+     include(${PROJECT_SOURCE_DIR}/cmake/UseLATEX.cmake)
+@@ -14,6 +18,6 @@ endif()
+ 
+ install(
+     FILES manual.pdf
+-    DESTINATION share/doc/flann
++    DESTINATION ${DOCDIR}
+     OPTIONAL
+ )
diff --git a/sci-libs/flann/files/flann-1.8.4-examples.patch b/sci-libs/flann/files/flann-1.8.4-examples.patch
new file mode 100644
index 000000000000..b3346b35f73c
--- /dev/null
+++ b/sci-libs/flann/files/flann-1.8.4-examples.patch
@@ -0,0 +1,35 @@
+From 3922081fbd6710f4b72421069f6bf24dc37d35a8 Mon Sep 17 00:00:00 2001
+From: Casey Goodlett <casey.goodlett@kitware.com>
+Date: Thu, 8 Aug 2013 18:42:45 -0400
+Subject: [PATCH] Option to disable example building
+
+---
+ CMakeLists.txt | 5 ++++-
+ 1 file changed, 4 insertions(+), 1 deletion(-)
+
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 5b19367..410a8f9 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -53,6 +53,7 @@ option(BUILD_C_BINDINGS "Build C bindings" ON)
+ option(BUILD_PYTHON_BINDINGS "Build Python bindings" ON)
+ option(BUILD_MATLAB_BINDINGS "Build Matlab bindings" ON)
+ option(BUILD_CUDA_LIB "Build CUDA library" OFF)
++option(BUILD_EXAMPLES "Build examples" ON)
+ option(USE_OPENMP "Use OpenMP multi-threading" ON)
+ option(USE_MPI "Use MPI" OFF)
+ 
+@@ -154,7 +155,9 @@ endif()
+ 
+ add_subdirectory( cmake )
+ add_subdirectory( src )
+-add_subdirectory( examples )
++if (BUILD_EXAMPLES)
++  add_subdirectory( examples )
++endif(BUILD_EXAMPLES)
+ add_subdirectory( test )
+ add_subdirectory( doc )
+ 
+-- 
+1.8.5.1
+
diff --git a/sci-libs/flann/files/flann-1.8.4-multilib.patch b/sci-libs/flann/files/flann-1.8.4-multilib.patch
new file mode 100644
index 000000000000..17a9d65dd778
--- /dev/null
+++ b/sci-libs/flann/files/flann-1.8.4-multilib.patch
@@ -0,0 +1,15 @@
+ cmake/flann_utils.cmake | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/cmake/flann_utils.cmake b/cmake/flann_utils.cmake
+index 1a10939..afe4742 100644
+--- a/cmake/flann_utils.cmake
++++ b/cmake/flann_utils.cmake
+@@ -1,6 +1,6 @@
+ macro(GET_OS_INFO)
+     string(REGEX MATCH "Linux" OS_IS_LINUX ${CMAKE_SYSTEM_NAME})
+-    set(FLANN_LIB_INSTALL_DIR "lib")
++    set(FLANN_LIB_INSTALL_DIR "lib${LIB_SUFFIX}")
+     set(FLANN_INCLUDE_INSTALL_DIR
+         "include/${PROJECT_NAME_LOWER}-${FLANN_MAJOR_VERSION}.${FLANN_MINOR_VERSION}")
+ endmacro(GET_OS_INFO)
diff --git a/sci-libs/flann/files/flann-1.8.4-options.patch b/sci-libs/flann/files/flann-1.8.4-options.patch
new file mode 100644
index 000000000000..dd212aca66a4
--- /dev/null
+++ b/sci-libs/flann/files/flann-1.8.4-options.patch
@@ -0,0 +1,41 @@
+ CMakeLists.txt | 13 +++++++++++--
+ 1 file changed, 11 insertions(+), 2 deletions(-)
+
+diff --git a/CMakeLists.txt b/CMakeLists.txt
+index 410a8f9..b6244a4 100644
+--- a/CMakeLists.txt
++++ b/CMakeLists.txt
+@@ -54,6 +54,8 @@ option(BUILD_PYTHON_BINDINGS "Build Python bindings" ON)
+ option(BUILD_MATLAB_BINDINGS "Build Matlab bindings" ON)
+ option(BUILD_CUDA_LIB "Build CUDA library" OFF)
+ option(BUILD_EXAMPLES "Build examples" ON)
++option(BUILD_TESTS "Build tests" ON)
++option(BUILD_DOC "Build documentation" ON)
+ option(USE_OPENMP "Use OpenMP multi-threading" ON)
+ option(USE_MPI "Use MPI" OFF)
+ 
+@@ -158,8 +160,12 @@ add_subdirectory( src )
+ if (BUILD_EXAMPLES)
+   add_subdirectory( examples )
+ endif(BUILD_EXAMPLES)
+-add_subdirectory( test )
+-add_subdirectory( doc )
++if (BUILD_TESTS)
++  add_subdirectory( test )
++endif (BUILD_TESTS)
++if (BUILD_DOC)
++  add_subdirectory( doc )
++endif (BUILD_DOC)
+ 
+ 
+ # CPACK options
+@@ -202,6 +208,9 @@ include(CPack)
+ message(STATUS "Install prefix: ${CMAKE_INSTALL_PREFIX}")
+ message(STATUS "Build type: ${CMAKE_BUILD_TYPE}")
+ message(STATUS "Building C bindings: ${BUILD_C_BINDINGS}")
++message(STATUS "Building examples: ${BUILD_EXAMPLES}")
++message(STATUS "Building tests: ${BUILD_TESTS}")
++message(STATUS "Building documentation: ${BUILD_DOC}")
+ message(STATUS "Building python bindings: ${BUILD_PYTHON_BINDINGS}")
+ message(STATUS "Building matlab bindings: ${BUILD_MATLAB_BINDINGS}")
+ message(STATUS "Building CUDA library: ${BUILD_CUDA_LIB}")