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Diffstat (limited to 'sci-biology/diya/diya-1.0_rc4.ebuild')
| -rw-r--r-- | sci-biology/diya/diya-1.0_rc4.ebuild | 42 |
1 files changed, 0 insertions, 42 deletions
diff --git a/sci-biology/diya/diya-1.0_rc4.ebuild b/sci-biology/diya/diya-1.0_rc4.ebuild deleted file mode 100644 index ae923b60da8d..000000000000 --- a/sci-biology/diya/diya-1.0_rc4.ebuild +++ /dev/null @@ -1,42 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI="5" - -inherit perl-module - -DESCRIPTION="Do It Yourself Annotation, tools & libraries for sequence assembly & annotation" -HOMEPAGE="http://gmod.org/wiki/Diya" -SRC_URI="mirror://sourceforge/diyg/files/diya/diya-1.0/diya-${PV/_/-}.tar.gz" - -LICENSE="GPL-3" -SLOT="0" -IUSE="-minimal" -KEYWORDS="~amd64 ~x86" - -DEPEND="sci-biology/bioperl - dev-perl/Data-Utilities - dev-perl/XML-Simple" -RDEPEND="${DEPEND} - !minimal? ( - sci-biology/mummer - sci-biology/glimmer - sci-biology/trnascan-se - sci-biology/infernal )" - -# see ftp://ftp.ncbi.nih.gov/blast/ to check if blast and blast+ are different from ncbi-tools and ncbi-tools++ -# * rfamscan.pl v0.1 (http://www.sanger.ac.uk/Users/sgj/code/) -# * UniRef50 (http://www.ebi.ac.uk/uniref/) -# * Protein Clusters (ftp://ftp.ncbi.nih.gov/genomes/Bacteria/CLUSTERS/) -# The file cddid_all.tbl can be found at ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/. - -S="${WORKDIR}/diya-${PV/_/-}" - -SRC_TEST=do - -src_install() { - mydoc="INSTALL README docs/diya.html" - perl-module_src_install - insinto /usr/share/${PN} - doins -r diya.conf docs examples scripts -} |