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Diffstat (limited to 'sci-biology/emboss/files/emboss-6.3.1_p4-r1_plcol.patch')
-rw-r--r--sci-biology/emboss/files/emboss-6.3.1_p4-r1_plcol.patch112
1 files changed, 112 insertions, 0 deletions
diff --git a/sci-biology/emboss/files/emboss-6.3.1_p4-r1_plcol.patch b/sci-biology/emboss/files/emboss-6.3.1_p4-r1_plcol.patch
new file mode 100644
index 000000000000..0f5e592b77f1
--- /dev/null
+++ b/sci-biology/emboss/files/emboss-6.3.1_p4-r1_plcol.patch
@@ -0,0 +1,112 @@
+--- EMBOSS-6.3.1/ajax/graphics/ajgraph.c 2012-07-19 23:29:05.000000000 +0200
++++ /tmp/ajgraph.c 2012-07-19 23:25:00.000000000 +0200
+@@ -1645,14 +1645,14 @@
+ ** @return [void]
+ ** @@
+ ******************************************************************************/
+
+ static void GraphSetPen(ajint colour)
+ {
+- ajDebug("=g= plcol(%d '%s') [colour]\n", colour, graphColourName[colour]);
+- plcol((PLINT)colour);
++ ajDebug("=g= plcol0(%d '%s') [colour]\n", colour, graphColourName[colour]);
++ plcol0((PLINT)colour);
+
+ return;
+ }
+
+
+
+--- EMBOSS-6.3.1/plplot/plcore.c 2007-10-24 15:14:43.000000000 +0200
++++ /tmp/plcore.c 2012-07-19 23:25:00.000000000 +0200
+@@ -1709,13 +1709,13 @@
+ if (plsc->zdigmax == 0)
+ plsc->zdigmax = 3;
+
+ /* Switch to graphics mode and set color and arrow style*/
+
+ plgra();
+- plcol(1);
++ plcol0(1);
+
+ plstyl(0, &mk, &sp);
+ plpat(1, &inc, &del);
+
+ plsvect(def_arrow_x, def_arrow_y, 6, 0);
+
+--- EMBOSS-6.3.1/plplot/plstripc.c 2007-05-08 11:09:37.000000000 +0200
++++ /tmp/plstripc.c 2012-07-19 23:25:00.000000000 +0200
+@@ -153,17 +153,17 @@
+
+ plgchr(&sc, &dy);
+ sc = dy = dy/100;
+ plwind(-0.01, 1.01, -0.01, 1.01);
+ for (i=0; i<PEN; i++) {
+ if (mystripc->npts[i] || first) {
+- plcol(mystripc->colline[i]);
++ plcol0(mystripc->colline[i]);
+ pllsty(mystripc->styline[i]);
+ pljoin(mystripc->xlpos, mystripc->ylpos - sc,
+ mystripc->xlpos + 0.1, mystripc->ylpos - sc);
+- plcol(mystripc->collab);
++ plcol0(mystripc->collab);
+ plptex(mystripc->xlpos + 0.11, mystripc->ylpos - sc,
+ 0., 0., 0, mystripc->legline[i]);
+ sc += dy;
+ }
+ }
+ plwind(mystripc->xmin, mystripc->xmax, mystripc->ymin, mystripc->ymax);
+@@ -184,34 +184,34 @@
+ PLFLT x[]={0.,1.,1.,0.}, y[]={0.,0.,1.,1.};
+
+ /* Set up window */
+
+ plvpor(0,1,0,1);
+ plwind(0,1,0,1);
+- plcol(0);plpsty(0);
++ plcol0(0);plpsty(0);
+ plfill(4, &x[0], &y[0]);
+ plvsta();
+
+ /* Draw box and same window dimensions */
+ mystrip->wxmin=mystrip->xmin;
+ mystrip->wxmax=mystrip->xmax;
+ mystrip->wymin=mystrip->ymin;
+ mystrip->wymax=mystrip->ymax; /* FIXME - can exist some redundancy here */
+
+ plwind(mystrip->xmin, mystrip->xmax, mystrip->ymin, mystrip->ymax);
+
+ pllsty(1);
+- plcol(mystrip->colbox);
++ plcol0(mystrip->colbox);
+ plbox(mystrip->xspec, 0.0, 0, mystrip->yspec, 0.0, 0);
+
+- plcol(mystrip->collab);
++ plcol0(mystrip->collab);
+ pllab(mystrip->labx, mystrip->laby, mystrip->labtop);
+
+ for (i=0; i<PEN; i++) {
+ if (mystrip->npts[i] > 0) {
+- plcol(mystrip->colline[i]);pllsty(mystrip->styline[i]);
++ plcol0(mystrip->colline[i]);pllsty(mystrip->styline[i]);
+ plline(mystrip->npts[i], mystrip->x[i], mystrip->y[i]);
+ }
+ }
+
+ plstrip_legend(mystrip,0);
+ }
+@@ -269,13 +269,13 @@
+ if (stripc->xmax - stripc->xmin < stripc->xlen) {
+ if( yasc == 0) {
+
+ /* If user has changed subwindow, make shure we have the correct one */
+ plvsta();
+ plwind(stripc->wxmin, stripc->wxmax, stripc->wymin, stripc->wymax); /* FIXME - can exist some redundancy here */
+- plcol(stripc->colline[p]); pllsty(stripc->styline[p]);
++ plcol0(stripc->colline[p]); pllsty(stripc->styline[p]);
+ if ((stripc->npts[p]-2) < 0)
+ plP_movwor(stripc->x[p][stripc->npts[p]-1], stripc->y[p][stripc->npts[p]-1]);
+ else
+ plP_movwor(stripc->x[p][stripc->npts[p]-2], stripc->y[p][stripc->npts[p]-2]);
+ plP_drawor(stripc->x[p][stripc->npts[p]-1], stripc->y[p][stripc->npts[p]-1]);
+ plflush();