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Diffstat (limited to 'sci-biology/recon/recon-1.06-r1.ebuild')
-rw-r--r-- | sci-biology/recon/recon-1.06-r1.ebuild | 36 |
1 files changed, 36 insertions, 0 deletions
diff --git a/sci-biology/recon/recon-1.06-r1.ebuild b/sci-biology/recon/recon-1.06-r1.ebuild new file mode 100644 index 000000000000..86e820f49e9f --- /dev/null +++ b/sci-biology/recon/recon-1.06-r1.ebuild @@ -0,0 +1,36 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI="4" + +inherit eutils + +DESCRIPTION="Automated de novo identification of repeat families from genomic sequences" +HOMEPAGE="http://selab.janelia.org/recon.html http://www.repeatmasker.org/RepeatModeler.html" +SRC_URI="http://www.repeatmasker.org/RECON${PV}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +IUSE="examples" +KEYWORDS="~amd64 ~x86" + +S="${WORKDIR}/RECON${PV}" + +src_prepare() { + epatch "${FILESDIR}"/${PV}-buffer-overflow.patch + sed -i 's|$path = "";|$path = "/usr/libexec/'${PN}'";|' scripts/recon.pl || die +} + +src_compile() { + emake -C src +} + +src_install() { + dobin scripts/* + exeinto /usr/libexec/${PN} + doexe src/{edgeredef,eledef,eleredef,famdef,imagespread} + dodoc 00README + insinto /usr/share/${PN} + use examples && doins -r Demos +} |