diff options
Diffstat (limited to 'sci-libs/gerris/files')
4 files changed, 87 insertions, 0 deletions
diff --git a/sci-libs/gerris/files/gerris-20130531-hypre-no-mpi.patch b/sci-libs/gerris/files/gerris-20130531-hypre-no-mpi.patch new file mode 100644 index 000000000000..f05512efbddf --- /dev/null +++ b/sci-libs/gerris/files/gerris-20130531-hypre-no-mpi.patch @@ -0,0 +1,22 @@ +patch to allow gerris to use hypre without mpi + +--- configure.ac 2013-05-30 23:57:18.000000000 -0700 ++++ configure.ac.new 2013-07-22 13:52:36.083974663 -0700 +@@ -336,7 +336,7 @@ + + # Build hypre module if HYPRE is installed + hypre=no +-if test "x$use_mpicc" = "xyes" ; then # HYPRE needs MPI ++# hypre does not need mpi + AC_CHECK_LIB(HYPRE, HYPRE_IJMatrixCreate, hypre="yes", hypre="no", [-lm]) + if test x$hypre = xyes; then + AC_CHECK_HEADERS(HYPRE.h, hypre="yes", hypre="no") +@@ -344,7 +344,7 @@ + if test x$hypre = xno; then + AC_MSG_WARN([HYPRE not found. hypre Module won't be available.]) + fi +-fi ++ + AM_CONDITIONAL(BUILD_HYPRE, test x$hypre = xyes) + + # Build lis module if lis is installed diff --git a/sci-libs/gerris/files/gerris-20130531-lis-matrix-csr.patch b/sci-libs/gerris/files/gerris-20130531-lis-matrix-csr.patch new file mode 100644 index 000000000000..21d6810bbd2b --- /dev/null +++ b/sci-libs/gerris/files/gerris-20130531-lis-matrix-csr.patch @@ -0,0 +1,11 @@ +--- modules/lis.c.orig 2013-07-22 15:34:05.346631560 -0700 ++++ modules/lis.c 2013-07-22 15:33:28.621427315 -0700 +@@ -45,7 +45,7 @@ + g_array_index (stencil->coeff, double, j), + A); + } +- lis_matrix_set_type (A, LIS_MATRIX_CRS); ++ lis_matrix_set_type (A, LIS_MATRIX_CSR); + lis_matrix_assemble (A); + + LIS_VECTOR b, x; diff --git a/sci-libs/gerris/files/gerris-20130531-use-blas-lapack-system.patch b/sci-libs/gerris/files/gerris-20130531-use-blas-lapack-system.patch new file mode 100644 index 000000000000..4c8985ce5e77 --- /dev/null +++ b/sci-libs/gerris/files/gerris-20130531-use-blas-lapack-system.patch @@ -0,0 +1,33 @@ +--- modules/Makefile.am.orig 2013-07-22 14:13:10.339130133 -0700 ++++ modules/Makefile.am 2013-07-22 14:15:10.770813929 -0700 +@@ -105,7 +105,7 @@ + libstokes2D_la_LIBADD = $(GFS2D_LIBS) + + libwavewatch2D_la_SOURCES = wavewatch.c +-libwavewatch2D_la_LIBADD = $(GFS2D_LIBS) -Lwavewatch -lwavewatch -L/usr/lib/gcc/i486-linux-gnu/4.2 -lgfortran ++libwavewatch2D_la_LIBADD = $(GFS2D_LIBS) -Lwavewatch -lwavewatch + libwavewatch2D_la_CFLAGS = $(AM_CFLAGS) -DFTT_2D=1 \ + -DW3SRCE=`nm wavewatch/libwavewatch.a | grep w3srce | awk '{ if ($$2 == "T") print $$3; }'` \ + -DGFSW3INIT=`nm wavewatch/libwavewatch.a | grep gfsw3_init | awk '{ if ($$2 == "T") print $$3; }'` +@@ -164,17 +164,17 @@ + + liblis3D_la_SOURCES = lis.c + liblis3D_la_CFLAGS = $(AM_CFLAGS) +-liblis3D_la_LIBADD = $(GFS3D_LIBS) -llis -lgfortran -lm ++liblis3D_la_LIBADD = $(GFS3D_LIBS) -llis -lm + liblis2D_la_SOURCES = lis.c + liblis2D_la_CFLAGS = $(AM_CFLAGS) -DFTT_2D=1 +-liblis2D_la_LIBADD = $(GFS2D_LIBS) -llis -lgfortran -lm ++liblis2D_la_LIBADD = $(GFS2D_LIBS) -llis -lm + + libagmg3D_la_SOURCES = agmg.c dagmg.f90 + libagmg3D_la_CFLAGS = $(AM_CFLAGS) +-libagmg3D_la_LIBADD = $(GFS3D_LIBS) -llapack -lblas -lgfortran -lm ++libagmg3D_la_LIBADD = $(GFS3D_LIBS) $(LAPACK_LIBS) $(BLAS_LIBS) -lm + libagmg2D_la_SOURCES = agmg.c dagmg.f90 + libagmg2D_la_CFLAGS = $(AM_CFLAGS) -DFTT_2D=1 +-libagmg2D_la_LIBADD = $(GFS2D_LIBS) -llapack -lblas -lgfortran -lm ++libagmg2D_la_LIBADD = $(GFS2D_LIBS) $(LAPACK_LIBS) $(BLAS_LIBS) -lm + + libokada3D_la_SOURCES = okada.c + libokada3D_la_CFLAGS = $(AM_CFLAGS) diff --git a/sci-libs/gerris/files/gerris-hypre-no-mpi.patch b/sci-libs/gerris/files/gerris-hypre-no-mpi.patch new file mode 100644 index 000000000000..2e3aede8b7d6 --- /dev/null +++ b/sci-libs/gerris/files/gerris-hypre-no-mpi.patch @@ -0,0 +1,21 @@ +--- configure.in.orig 2012-08-08 17:19:49.374366942 +0100 ++++ configure.in 2012-08-08 17:20:40.585155226 +0100 +@@ -334,7 +334,8 @@ + + # Build hypre module if HYPRE is installed + hypre=no +-if test "x$use_mpicc" = "xyes" ; then # HYPRE needs MPI ++# hypre does not need mpi ++#if test "x$use_mpicc" = "xyes" ; then # HYPRE needs MPI + AC_CHECK_LIB(HYPRE, HYPRE_IJMatrixCreate, hypre="yes", hypre="no", [-lm]) + if test x$hypre = xyes; then + AC_CHECK_HEADERS(HYPRE.h, hypre="yes", hypre="no") +@@ -342,7 +343,7 @@ + if test x$hypre = xno; then + AC_MSG_WARN([HYPRE not found. hypre Module won't be available.]) + fi +-fi ++#fi + AM_CONDITIONAL(BUILD_HYPRE, test x$hypre = xyes) + + # Build lis module if lis is installed |