repo/gentoo.git - Official Gentoo ebuild repository

	Commit message (Collapse)	Author	Age	Files	Lines
*	sci-biology/bamtools: Use ninja for building	David Seifert	2018-06-02	2	-2/+4
\| \| \| \|	Package-Manager: Portage-2.3.40, Repoman-2.3.9
*	sci-biology/biopython: Bump to 1.71	David Seifert	2018-05-27	2	-0/+58
\| \| \| \| \|	Closes: https://bugs.gentoo.org/653006 Package-Manager: Portage-2.3.40, Repoman-2.3.9
*	sci-biology/phylip: Update dependencies (x11-proto/* -> x11-base/xorg-proto).	Arfrever Frehtes Taifersar Arahesis	2018-05-21	3	-5/+5
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*	sci-biology/wgs-assembler: remove old	Michael Mair-Keimberger	2018-05-21	1	-67/+0
\| \| \| \|	Closes: https://github.com/gentoo/gentoo/pull/8512
*	sci-biology/glimmer: use HTTPs	Michael Mair-Keimberger	2018-05-21	2	-5/+5
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*	sci-biology/velvet: use HTTPs	Michael Mair-Keimberger	2018-05-21	2	-6/+6
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*	sci-biology/mafft: use HTTPs	Michael Mair-Keimberger	2018-05-21	3	-9/+9
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*	sci-biology/mothur: use HTTPs	Michael Mair-Keimberger	2018-05-21	1	-3/+3
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*	sci-biology/prosite: use HTTPs	Michael Mair-Keimberger	2018-05-21	1	-2/+2
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*	sci-biology/ncbi-tools: use HTTPs	Michael Mair-Keimberger	2018-05-21	1	-2/+2
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*	sci-biology/fasta: use HTTPs	Michael Mair-Keimberger	2018-05-21	1	-2/+2
\| \| \| \|	Closes: https://github.com/gentoo/gentoo/pull/8513
*	sci-biology/seqan: inherit versionator	Andreas Sturmlechner	2018-05-19	1	-2/+2
\| \| \| \|	Package-Manager: Portage-2.3.38, Repoman-2.3.9
*	sci-biology/seqan: inherit versionator	Andreas Sturmlechner	2018-05-18	1	-2/+2
\| \| \| \|	Package-Manager: Portage-2.3.38, Repoman-2.3.9
*	sci-biology/biopandas: Drop old	Andreas Sturmlechner	2018-05-16	2	-43/+0
\| \| \| \|	Package-Manager: Portage-2.3.36, Repoman-2.3.9
*	sci-biology/wgs-assembler: amd64 stable wrt bug #374815	Agostino Sarubbo	2018-05-08	1	-1/+1
\| \| \| \| \|	Package-Manager: Portage-2.3.24, Repoman-2.3.6 RepoMan-Options: --include-arches="amd64"
*	sci-biology/wgs-assembler: x86 stable (bug #374815)	Thomas Deutschmann	2018-05-07	1	-1/+1
\| \| \| \|	Package-Manager: Portage-2.3.34, Repoman-2.3.9
*	sci-biology/bioruby: add ruby24	Hans de Graaff	2018-05-06	1	-1/+1
\| \| \| \|	Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/wgs-assembler: Revision bump using libtirpc, bug 374815	Andreas K. Hüttel	2018-04-29	2	-0/+88
\| \| \| \| \|	Bug: https://bugs.gentoo.org/374815 Package-Manager: Portage-2.3.31, Repoman-2.3.9
*	update pypi HOMEPAGE to avoid redirection	Michael Mair-Keimberger	2018-04-26	3	-3/+3
\| \| \| \|	Closes: https://github.com/gentoo/gentoo/pull/8080
*	Retirement: ercpe@gentoo.org bug #475224	Amy Liffey	2018-04-26	1	-4/+0
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*	sci-biology/foldingathome: fix systemd unit	Ian Stakenvicius	2018-04-25	1	-5/+5
\| \| \| \| \| \| \| \| \|	This isn't a perfect fix since if the EPREFIX path contains characters that need to be quoted the paths will still fail, however when compared to a systemd unit that doesn't work at all this is significantly better than nothing. Bug: http://bugs.gentoo.org/645200 Package-Manager: Portage-2.3.19, Repoman-2.3.6
*	Replace pypi.python.org with pypi.org in HOMEPAGE	Mike Gilbert	2018-04-19	4	-4/+4
\| \| \| \|	Bug: https://bugs.gentoo.org/653540
*	sci-biology/bioruby: remove unused patch	Michael Mair-Keimberger	2018-04-18	1	-29/+0
\| \| \| \|	Closes: https://github.com/gentoo/gentoo/pull/8034
*	sci-biology/beast-mcmc: remove last rited package	Mikle Kolyada	2018-04-15	4	-177/+0
\| \| \| \|	Closes: https://bugs.gentoo.org/514432
*	sci-biology/bioruby: remove broken ruby22-only version, bug 645612	Hans de Graaff	2018-04-14	2	-38/+0
\| \| \| \|	Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/bioruby: stable on amd64 and x86, bug 628636	Hans de Graaff	2018-04-14	1	-3/+3
\| \| \| \|	Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/qrna: Drop old	Andreas Sturmlechner	2018-04-06	1	-58/+0
\| \| \| \|	Package-Manager: Portage-2.3.28, Repoman-2.3.9
*	sci-biology/qrna: DEPEND on sci-biology/hmmer:2	Martin Mokrejš	2018-04-06	1	-0/+58
\| \| \| \|	Closes: https://github.com/gentoo/gentoo/pull/7134
*	sci-biology/clustalx: Drop Qt4-based	Andreas Sturmlechner	2018-03-18	2	-92/+0
\| \| \| \|	Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/clustalx: x86 stable (bug #644726)	Thomas Deutschmann	2018-03-18	1	-1/+1
\| \| \| \|	Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/clustalx: amd64 stable wrt bug #644726	Mikle Kolyada	2018-03-17	1	-1/+1
\| \| \| \|	Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/abyss: bump up to 2.0.3	Sergei Trofimovich	2018-03-15	2	-0/+55
\| \| \| \|	Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/rebase: Bump to latest release	Justin Lecher	2018-03-11	2	-0/+46
\| \| \| \| \|	Package-Manager: Portage-2.3.20, Repoman-2.3.6 Signed-off-by: Justin Lecher <jlec@gentoo.org>
*	sci-biology/clustalx: Switch to Qt5	Andreas Sturmlechner	2018-03-04	2	-0/+351
\| \| \| \| \| \| \|	Thanks to Debian. Bug: https://bugs.gentoo.org/644726 Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/amos: Drop old	Andreas Sturmlechner	2018-03-03	1	-53/+0
\| \| \| \| \|	Closes: https://bugs.gentoo.org/645140 Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/amos: Drop USE=qt4	Andreas Sturmlechner	2018-03-03	1	-0/+52
\| \| \| \| \|	Bug: https://bugs.gentoo.org/645140 Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/phylip: block against dev-lang/elixir, bug #537514	Sergei Trofimovich	2018-02-15	1	-0/+55
\| \| \| \| \| \|	Reported-by: Toralf Förster Bug: https://bugs.gentoo.org/537514 Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/seqan: Add live ebuild	David Seifert	2018-02-11	1	-0/+90
\| \| \| \|	Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/seqan: Version bump to 2.4.0	David Seifert	2018-02-11	4	-4/+112
\| \| \| \| \| \| \|	* Add USE=tools option to install command-line tools Closes: https://bugs.gentoo.org/618278 Package-Manager: Portage-2.3.24, Repoman-2.3.6
*	sci-biology/amos: Add missing USE=qt4 build switch	Andreas Sturmlechner	2018-01-15	1	-2/+7
\| \| \| \|	Package-Manager: Portage-2.3.19, Repoman-2.3.6
*	sci-biology/phred: Rehash	David Seifert	2018-01-14	1	-1/+1
\| \| \| \| \|	Closes: https://bugs.gentoo.org/642906 Package-Manager: Portage-2.3.19, Repoman-2.3.6
*	sci-biology/phrap: Rehash	David Seifert	2018-01-14	1	-1/+1
\| \| \| \|	Package-Manager: Portage-2.3.19, Repoman-2.3.6
*	sci-biology/consed: Rehash	David Seifert	2018-01-14	1	-2/+2
\| \| \| \|	Package-Manager: Portage-2.3.19, Repoman-2.3.6
*	sci-biology/repeatmasker-libraries: Update Manifest hashes.	Ulrich Müller	2018-01-13	1	-1/+1
\| \| \| \|	Bug: https://bugs.gentoo.org/642906
*	sci-biology/fastx_toolkit: Initial addition	David Seifert	2018-01-10	5	-0/+119
\| \| \| \|	Package-Manager: Portage-2.3.19, Repoman-2.3.6
*	sci-biology/libgtextutils: Initial addition	David Seifert	2018-01-10	5	-0/+132
\| \| \| \| \|	Closes: https://bugs.gentoo.org/486380 Package-Manager: Portage-2.3.19, Repoman-2.3.6
*	sci-biology/bcftools: Update contact for mmokrejs	Michał Górny	2018-01-06	1	-1/+1
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*	sci-biology/STAR: Update contact for mmokrejs	Michał Górny	2018-01-06	1	-1/+1
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*	sci-biology/HTSeq: Update contact for mmokrejs	Michał Górny	2018-01-06	1	-1/+1
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*	sci-biology/arb: Remove old	David Seifert	2018-01-01	8	-332/+0
\| \| \| \|	Package-Manager: Portage-2.3.19, Repoman-2.3.6