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# Copyright 1999-2015 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
EAPI=5
DESCRIPTION="Shotgun assembly and alignment utilities"
HOMEPAGE="http://www.phrap.org/"
SRC_URI="phrap-${PV}-distrib.tar.gz"
LICENSE="phrap"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE=""
DEPEND=""
RDEPEND="
dev-lang/perl
dev-perl/perl-tk"
S="${WORKDIR}"
RESTRICT="fetch"
pkg_nofetch() {
einfo "Please visit http://www.phrap.org/phredphrapconsed.html and obtain the file"
einfo "\"distrib.tar.gz\", then rename it to \"phrap-${PV}-distrib.tar.gz\""
einfo "and put it in ${DISTDIR}"
}
src_prepare() {
sed -i 's/CFLAGS=/#CFLAGS=/' makefile || die
sed -i 's|#!/usr/local/bin/perl|#!/usr/bin/env perl|' phrapview || die
}
src_install() {
dobin cross_match loco phrap phrapview swat
newbin cluster cluster_phrap
for i in {general,phrap,swat}.doc ; do
newdoc ${i} ${i}.txt
done
}
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