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# Copyright 1999-2014 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
EAPI=5
inherit java-pkg-2 java-ant-2
MY_P="${PN}-source-${PV}"
DESCRIPTION="Reads and writes nucleic/protein sequences in various formats"
HOMEPAGE="http://iubio.bio.indiana.edu/soft/molbio/readseq/"
# Originally unversioned at
# http://iubio.bio.indiana.edu/soft/molbio/readseq/java/readseq-source.zip.
# Renamed to the date of the modification and mirrored
SRC_URI="https://dev.gentoo.org/~dberkholz/distfiles/${MY_P}.zip"
LICENSE="public-domain"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE=""
RDEPEND="!=sci-biology/meme-4.8.1
>=virtual/jre-1.4"
DEPEND=">=virtual/jdk-1.4
app-arch/unzip"
S=${WORKDIR}
java_prepare() {
rm "${S}"/lib/* || die
epatch "${FILESDIR}"/${PV}-*
}
src_install() {
java-pkg_dojar build/readseq.jar
java-pkg_dolauncher
}
pkg_postinst() {
elog "Documentation is available at"
elog "http://iubio.bio.indiana.edu/soft/molbio/readseq/java/Readseq2-help.html"
}
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