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authorJeffrey Gardner <je_fro@gentoo.org>2007-08-09 11:11:05 +0000
committerJeffrey Gardner <je_fro@gentoo.org>2007-08-09 11:11:05 +0000
commit0024ab7d1b5c9e0368c8b4008947ecf4d82ce1ac (patch)
treed1dfb334b63c774f7841324417a83ee9e481581d /sci-biology
parentMoving cluster to science overlay, importing new projects. (diff)
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starting work on TreeView, a nice GUI for sci-biology/cluster
svn path=/; revision=28
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/jtreeview/Manifest8
-rw-r--r--sci-biology/jtreeview/files/digest-jtreeview-1.1.13
-rw-r--r--sci-biology/jtreeview/jtreeview-1.1.1.ebuild37
3 files changed, 48 insertions, 0 deletions
diff --git a/sci-biology/jtreeview/Manifest b/sci-biology/jtreeview/Manifest
new file mode 100644
index 0000000..86d4210
--- /dev/null
+++ b/sci-biology/jtreeview/Manifest
@@ -0,0 +1,8 @@
+DIST TreeView-1.1.1-src.tar.gz 3144774 RMD160 93e1dd35bdcf5af7e74462b6a8c648d20aea64b9 SHA1 1ad49807a4729caaa7a6ccfbbd3bc7cf5ce05e8a SHA256 e44e7035ffe93fd0e3500ad00ba276e15e9882dff768f2146116b62e4d52398a
+EBUILD jtreeview-1.1.1.ebuild 961 RMD160 65bdda3ab3a1043d7f8bf7b204355f48500b2c33 SHA1 d1ed78703b0f3b6bade13d514b6c98f4db07c89a SHA256 c7e91d52930b550e02450981775bd876241724b964c54587ca58b2c583c205ac
+MD5 2e44b87ac8bf387d2401928d131d12f8 jtreeview-1.1.1.ebuild 961
+RMD160 65bdda3ab3a1043d7f8bf7b204355f48500b2c33 jtreeview-1.1.1.ebuild 961
+SHA256 c7e91d52930b550e02450981775bd876241724b964c54587ca58b2c583c205ac jtreeview-1.1.1.ebuild 961
+MD5 ae6c760d6777e3aa120de7fa921192fa files/digest-jtreeview-1.1.1 259
+RMD160 37c62091fe02b62527b473649db7d5bd5ab8c227 files/digest-jtreeview-1.1.1 259
+SHA256 7211f1f8b8586967d90ca5ee45c88dfe2989d63729703ff55db3a24a762c6c2f files/digest-jtreeview-1.1.1 259
diff --git a/sci-biology/jtreeview/files/digest-jtreeview-1.1.1 b/sci-biology/jtreeview/files/digest-jtreeview-1.1.1
new file mode 100644
index 0000000..90cc222
--- /dev/null
+++ b/sci-biology/jtreeview/files/digest-jtreeview-1.1.1
@@ -0,0 +1,3 @@
+MD5 2b44fdf1fa2e2016dad3233380fd1b6e TreeView-1.1.1-src.tar.gz 3144774
+RMD160 93e1dd35bdcf5af7e74462b6a8c648d20aea64b9 TreeView-1.1.1-src.tar.gz 3144774
+SHA256 e44e7035ffe93fd0e3500ad00ba276e15e9882dff768f2146116b62e4d52398a TreeView-1.1.1-src.tar.gz 3144774
diff --git a/sci-biology/jtreeview/jtreeview-1.1.1.ebuild b/sci-biology/jtreeview/jtreeview-1.1.1.ebuild
new file mode 100644
index 0000000..54eb147
--- /dev/null
+++ b/sci-biology/jtreeview/jtreeview-1.1.1.ebuild
@@ -0,0 +1,37 @@
+# Copyright 1999-2007 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+inherit java-pkg-2 java-ant-2
+DESCRIPTION="Java TreeView renders gene expression data into several interactive
+views."
+MY_P="TreeView"
+HOMEPAGE="http://jtreeview.sourceforge.net/"
+SRC_URI="mirror://sourceforge/${PN}/${MY_P}-${PV}-src.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+
+DEPEND="dev-java/jarbundler
+ dev-java/xml-commons-external
+ dev-java/fop
+ dev-java/xerces
+ dev-java/nanoxml
+ dev-java/jarbundler"
+RDEPEND=">=virtual/jre-1.4
+ dev-java/nanoxml"
+
+S=${WORKDIR}/${MY_P}-${PV}-src
+src_unpack() {
+ unpack ${A}
+
+ cd ${S}/compile_lib
+ java-pkg_jar-from --build-only xerces-2 xercesImpl.jar
+ java-pkg_jar-from --build-only xml-commons-external-1.3 xml-apis.jar
+ java-pkg_jar-from --build-only jarbundler jarbundler.jar jarbundler-1.8.1.jar
+ cd ${S}/lib
+ java-pkg_jar-from nanoxml nanoxml.jar nanoxml-2.2.2.jar
+
+}