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author | Justin Lecher <jlec@gentoo.org> | 2013-06-16 21:43:57 +0200 |
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committer | Justin Lecher <jlec@gentoo.org> | 2013-06-16 21:43:57 +0200 |
commit | 36032ab3249b80b8d49af5f05d86878dc7c4b7a4 (patch) | |
tree | 5f7f24ef84a4680c7a2a9e414c0be3266ac953f8 | |
parent | sci-biology/sequin: Version BUmp; restrcit license; add QA_PREBUILT for binar... (diff) | |
download | sci-36032ab3249b80b8d49af5f05d86878dc7c4b7a4.tar.gz sci-36032ab3249b80b8d49af5f05d86878dc7c4b7a4.tar.bz2 sci-36032ab3249b80b8d49af5f05d86878dc7c4b7a4.zip |
sci-biology/smalt-bin: Version Bump; restrict license; add QA_PREBUILT for binaries
Package-Manager: portage-2.2.0_alpha180
-rw-r--r-- | sci-biology/smalt-bin/ChangeLog | 8 | ||||
-rw-r--r-- | sci-biology/smalt-bin/Manifest | 2 | ||||
-rw-r--r-- | sci-biology/smalt-bin/metadata.xml | 10 | ||||
-rw-r--r-- | sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild | 25 | ||||
-rw-r--r-- | sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild | 31 |
5 files changed, 44 insertions, 32 deletions
diff --git a/sci-biology/smalt-bin/ChangeLog b/sci-biology/smalt-bin/ChangeLog index f3268fd32..7f6f91f99 100644 --- a/sci-biology/smalt-bin/ChangeLog +++ b/sci-biology/smalt-bin/ChangeLog @@ -1,7 +1,13 @@ # ChangeLog for sci-biology/smalt-bin -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 +# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 # $Header: $ +*smalt-bin-0.7.4 (16 Jun 2013) + + 16 Jun 2013; Justin Lecher <jlec@gentoo.org> -smalt-bin-0.5.1.ebuild, + +smalt-bin-0.7.4.ebuild, metadata.xml: + Version Bump; restrict license; add QA_PREBUILT for binaries + 25 Jun 2011; Justin Lecher <jlec@gentoo.org> smalt-bin-0.5.1.ebuild: Cleaned ebuild and fixed LICENSE diff --git a/sci-biology/smalt-bin/Manifest b/sci-biology/smalt-bin/Manifest index f9f5194ab..0e8053bb2 100644 --- a/sci-biology/smalt-bin/Manifest +++ b/sci-biology/smalt-bin/Manifest @@ -1 +1 @@ -DIST smalt-0.5.1.tgz 534824 SHA256 c8bca18a7ded7ad4b7070be7478bd046cf2d6a0a81054dfd96ebdba65c0a49d0 +DIST smalt-0.7.4.tgz 1437480 SHA256 a6997fcbef746c57f889c3784b2bc9c399ad03562ed8d4a835180ba8cc6822fe SHA512 9c31f358ef4094566bdc67f92b2576e6cf15a010bbf7dc1eb4a66afb2107253dfe4947a529c10c579484ccd7aff6aaae048ea8b17fd468804b08d88fb6588e39 WHIRLPOOL 65c1a52608d26e3411a77137fa03c65ae30cc845d5e9f676ab4c1a53812f1fcbd2300b4e5a0a8839c24c00f526f0a5627b6facbec54cbe86af7d132857b728c1 diff --git a/sci-biology/smalt-bin/metadata.xml b/sci-biology/smalt-bin/metadata.xml index 07b525505..2bc893037 100644 --- a/sci-biology/smalt-bin/metadata.xml +++ b/sci-biology/smalt-bin/metadata.xml @@ -1,9 +1,9 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> - <maintainer> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> + <herd>sci-biology</herd> + <maintainer> + <email>mmokrejs@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild b/sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild deleted file mode 100644 index 7566c2097..000000000 --- a/sci-biology/smalt-bin/smalt-bin-0.5.1.ebuild +++ /dev/null @@ -1,25 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI=4 - -DESCRIPTION="Pairwise sequence alignment mapping DNA reads onto genomic reference, better over SSAHA2" -HOMEPAGE="http://www.sanger.ac.uk/resources/software/smalt/" -SRC_URI="ftp://ftp.sanger.ac.uk/pub4/resources/software/smalt/smalt-"${PV}".tgz" - -LICENSE="as-is" -SLOT="0" -KEYWORDS="~x86 ~amd64" -IUSE="" - -S="${WORKDIR}"/smalt-"${PV}" - -src_install(){ - use x86 && newbin smalt_i386 smalt - use amd64 && newbin smalt_x86_64 smalt - use ia64 && newbin smalt_ia64 - - dodoc NEWS smalt_manual.pdf - doman smalt.1 -} diff --git a/sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild b/sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild new file mode 100644 index 000000000..01acc05a9 --- /dev/null +++ b/sci-biology/smalt-bin/smalt-bin-0.7.4.ebuild @@ -0,0 +1,31 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +MY_PN="${PN%-bin}" +MY_P="${MY_PN}-${PV}" + +DESCRIPTION="Pairwise sequence alignment mapping DNA reads onto genomic reference, better over SSAHA2" +HOMEPAGE="http://www.sanger.ac.uk/resources/software/smalt/" +SRC_URI="ftp://ftp.sanger.ac.uk/pub4/resources/software/${MY_PN}/${MY_P}.tgz" + +LICENSE="all-rights-reserved" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +S="${WORKDIR}"/${MY_P} + +QA_PREBUILT="/opt/.*" + +src_install(){ + exeinto /opt/bin + use x86 && newexe ${MY_PN}_i386 ${MY_PN} + use amd64 && newexe ${MY_PN}_x86_64 ${MY_PN} + use ia64 && newexe ${MY_PN}_ia64 ${MY_PN} + + dodoc NEWS ${MY_PN}_manual.pdf + doman ${MY_PN}.1 +} |