Merged Justin's fix into portage.

5 files changed, 0 insertions, 99 deletions

diff --git a/sci-biology/stride/ChangeLog b/sci-biology/stride/ChangeLog
deleted file mode 100644
index 773e384a2..000000000
--- a/sci-biology/stride/ChangeLog
+++ /dev/null
@@ -1,29 +0,0 @@
-# ChangeLog for sci-biology/stride
-# Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/stride/ChangeLog,v 1.6 2007/09/20 14:35:18 coldwind Exp $
-
-  20 Sep 2007; Santiago M. Mola <coldwind@gentoo.org>
-  stride-20011129.ebuild:
-  Change sed separator to :, now it doesn't fail if CC contains a path.
-
-  22 May 2007; Olivier Fisette <ribosome@gentoo.org> stride-20011129.ebuild:
-  Updated home page.
-
-  03 Dec 2006; Steve Dibb <beandog@gentoo.org> stride-20011129.ebuild:
-  Add ~amd64, bug 147983
-
-  01 Oct 2006; Donnie Berkholz <dberkholz@gentoo.org>; metadata.xml:
-  Transfer to sci-biology herd from sci.
-
-  28 Jul 2006; Donnie Berkholz <dberkholz@gentoo.org>;
-  stride-20011129.ebuild:
-  Keyword ~ppc.
-
-*stride-20011129 (23 Jul 2006)
-
-  23 Jul 2006; Markus Dittrich <markusle@gentoo.org> +metadata.xml,
-  +stride-20011129.ebuild:
-  Initial import. Many thanks go the the author Dmitrij Frishman
-  <d.frishman@wzw.tum.de> for allowing us to distribute the source
-  and for an updated version of the code.
-
diff --git a/sci-biology/stride/Manifest b/sci-biology/stride/Manifest
deleted file mode 100644
index 614dcf293..000000000
--- a/sci-biology/stride/Manifest
+++ /dev/null
@@ -1,16 +0,0 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
-
-AUX LDFLAGS.patch 280 RMD160 f4f594bfab2ac2151bbf5d679c8ead73dec11f3f SHA1 f4eb9952b4e54d9ec2610cf7444c31efd23562e1 SHA256 3b2387a0649d76a24d5e9ed611ec3da43ca7844a3ce3704ebbad63699328fd10
-DIST stride-20060723-update.patch.bz2 5621 RMD160 c5ac88dcff4d074adb18fb09cc39f37e6b95d82a SHA1 a57e7780d2dd44ce53e72dac35ed4d8539a83d10 SHA256 8d48627c294b4efba67acba10fba47b20c0a8d5f7e06c2775a2d7eaaa0aa7b81
-DIST stride.tar.gz 56441 RMD160 6fdcf064f37ce44529446a043b56663af9765054 SHA1 f85cca717c79200bf33fa3a80323ccd9da471669 SHA256 d272700bccd046199f6ea1faed31a2a2662a7d5f13b7663736a1818ac18c87b9
-EBUILD stride-20011129-r1.ebuild 920 RMD160 18976a3042db65140c0e2b6092c294ae383e15ed SHA1 a748c29c7fb6d5ee9be71baf72cf5786fa773dd6 SHA256 8d4c39f18d9925f01bebeb21211758c7b7fe6dda642e87b61474b5babf2673b8
-MISC ChangeLog 1071 RMD160 d5e709200df9667ad51dc538b6b990ca7ed21919 SHA1 b385a5dcc68636fa354deed50a193511136ac3ab SHA256 8902fd640c18d9099daffb1c796da4e5e9d2c0c099dae06bd50fe368dfbed5c0
-MISC metadata.xml 262 RMD160 346498c47da29f51b223d00c4d2cdf35e69386f6 SHA1 fdf6cc4c581eb3162837bfde3334803445332489 SHA256 732b5b7d88c83d3b0bd0be860f512d9545353e2a2c89b873da8c2217394736c7
------BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.11 (GNU/Linux)
-
-iEYEARECAAYFAkrnVsQACgkQgAnW8HDreRYxNgCff1XsZFxnke/M9aHFofcrMhDa
-kP8AoMoJogn/UxQEW+3eU7CFePqEnk2K
-=nM1I
------END PGP SIGNATURE-----
diff --git a/sci-biology/stride/files/LDFLAGS.patch b/sci-biology/stride/files/LDFLAGS.patch
deleted file mode 100644
index 1761b1212..000000000
--- a/sci-biology/stride/files/LDFLAGS.patch
+++ /dev/null
@@ -1,11 +0,0 @@
---- Makefile	2009-10-27 21:18:45.000000000 +0100
-+++ Makefile.new	2009-10-27 21:19:00.000000000 +0100
-@@ -12,7 +12,7 @@
- 
- 
- stride : $(OBJECT)
--	$(CC) $(OBJECT) $(FLAGS)  $(BINDIR)/stride
-+	$(CC) $(LDFLAGS) $(OBJECT) $(FLAGS)  $(BINDIR)/stride
- 
- $(OBJECT) : stride.h protot.h
- 
diff --git a/sci-biology/stride/metadata.xml b/sci-biology/stride/metadata.xml
deleted file mode 100644
index 12ba45ba5..000000000
--- a/sci-biology/stride/metadata.xml
+++ /dev/null
@@ -1,9 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer>
-		<email>markusle@gentoo.org</email>
-		<name>Markus Dittrich</name>
-	</maintainer>
-	<herd>sci-biology</herd>
-</pkgmetadata>
diff --git a/sci-biology/stride/stride-20011129-r1.ebuild b/sci-biology/stride/stride-20011129-r1.ebuild
deleted file mode 100644
index 9e7f36000..000000000
--- a/sci-biology/stride/stride-20011129-r1.ebuild
+++ /dev/null
@@ -1,34 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI="2"
-
-inherit eutils toolchain-funcs
-
-DESCRIPTION="A program for protein secondary structure assignment from atomic coordinates."
-HOMEPAGE="http://www.embl-heidelberg.de/argos/stride/stride_info.html"
-SRC_URI="ftp://ftp.ebi.ac.uk/pub/software/unix/${PN}/src/${PN}.tar.gz
-	mirror://gentoo/${PN}-20060723-update.patch.bz2"
-
-SLOT="0"
-LICENSE="as-is"
-KEYWORDS="~amd64 ~ppc ~x86"
-IUSE=""
-
-S="${WORKDIR}"
-
-src_prepare() {
-	# this patch updates the source to the most recent
-	# version which was kindly provided by the author
-	epatch "${DISTDIR}/${PN}-20060723-update.patch.bz2"
-	epatch "${FILESDIR}"/LDFLAGS.patch
-
-	# fix makefile
-	sed -e "/^CC/s:gcc -g:$(tc-getCC) ${CFLAGS}:" -i Makefile || \
-		die "Failed to fix Makefile"
-}
-
-src_install() {
-	dobin ${PN} || die "Failed to install stride binary"
-}