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| author |   Andrew Ammerlaan <andrewammerlaan@riseup.net> | 2021-03-06 10:42:54 +0100 |
|---|---|---|
| committer | Andrew Ammerlaan <andrewammerlaan@riseup.net> | 2021-03-06 10:42:54 +0100 |
| commit | b56ce20506d4fe815bbf3ceef0c39e387023b63a (patch) | |
| tree | 403a00faac290436c31e6635897099dd6da9c42e /sci-biology/bismark | |
| parent | sci-biology/bismark: version bump 0.23.0, EAPI bump (diff) | |
| download | sci-b56ce20506d4fe815bbf3ceef0c39e387023b63a.tar.gz sci-b56ce20506d4fe815bbf3ceef0c39e387023b63a.tar.bz2 sci-b56ce20506d4fe815bbf3ceef0c39e387023b63a.zip | |
sci-biology/bismark: drop old
Package-Manager: Portage-3.0.16, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Diffstat (limited to 'sci-biology/bismark')
| -rw-r--r-- | sci-biology/bismark/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/bismark/bismark-0.13.0.ebuild | 31 |
2 files changed, 0 insertions, 32 deletions
diff --git a/sci-biology/bismark/Manifest b/sci-biology/bismark/Manifest index 1ca1c8416..6c227f9d5 100644 --- a/sci-biology/bismark/Manifest +++ b/sci-biology/bismark/Manifest @@ -1,2 +1 @@ DIST bismark-0.23.0.tar.gz 8802084 BLAKE2B fdd7cb13ac86ab99040dc6bd9baa5d8ab7f311b918298b9e8df327c54a7339e876e298354bded9a0f2280f9b069f0a64a588a9263a95663fb131e29d51536fd0 SHA512 1d0c9e62583a46e59431adec1acc6a3dfa39d4a306253d61a2d64ae44259650e2a6600bf67d8f6fb85ddb694949b3dccc47b18b3a18d74445ba7ea3ed0a2b3b0 -DIST bismark_v0.13.0.tar.gz 1667188 BLAKE2B c72f59d35a91e6511a6f52d93547eaff9eba20688ec86c592019689625ce8f31a3ba802c62850421c185c03b285ed8a53549059c7e99779abc376523aff8b79a SHA512 5915e28a9647189d49c584cc0a90ee64ddd444e4acf9bc6c6ae25e1b01b18ab35ca1c3fa3b59834d641fa6c4a4b465d43f2908d3b23f1d45297d49323d3511c0 diff --git a/sci-biology/bismark/bismark-0.13.0.ebuild b/sci-biology/bismark/bismark-0.13.0.ebuild deleted file mode 100644 index 98aa75a61..000000000 --- a/sci-biology/bismark/bismark-0.13.0.ebuild +++ /dev/null @@ -1,31 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -inherit toolchain-funcs - -DESCRIPTION="Map bisulfite converted sequence reads and cytosine methylation states" -HOMEPAGE="http://www.bioinformatics.babraham.ac.uk/projects/bismark/" -SRC_URI="http://www.bioinformatics.babraham.ac.uk/projects/${PN}/${PN}_v${PV}.tar.gz" - -LICENSE="GPL-3+" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="+doc" - -DEPEND="" -RDEPEND="sci-biology/bowtie" - -S="${WORKDIR}/${PN}_v${PV}" - -src_install() { - dobin \ - bismark{,2bedGraph,2report,_genome_preparation,_methylation_extractor} \ - coverage2cytosine deduplicate_bismark - insinto /usr/share/${P} - doins bismark_sitrep.tpl - dosym ../share/${P}/bismark_sitrep.tpl /usr/bin/bismark_sitrep.tpl - use doc \ - dodoc Bismark_User_Guide.pdf RRBS_Guide.pdf license.txt RELEASE_NOTES.txt -} |