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author | 2018-06-24 10:28:22 +0200 | |
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committer | 2018-06-24 10:28:22 +0200 | |
commit | cec8859662ffa14fd17eeb93abd6e9aeb0a088a6 (patch) | |
tree | b26e3f9c9aef9d2a13b88f554cdcb296c82fef37 /sci-biology/bwa/bwa-0.7.17.ebuild | |
parent | sci-biology/mouse-brain-atlases: new package (diff) | |
download | sci-cec8859662ffa14fd17eeb93abd6e9aeb0a088a6.tar.gz sci-cec8859662ffa14fd17eeb93abd6e9aeb0a088a6.tar.bz2 sci-cec8859662ffa14fd17eeb93abd6e9aeb0a088a6.zip |
sci-biology/bwa: version bump
Also fix HOMEPAGE which does not listen on https (anymore?)
Package-Manager: Portage-2.3.40, Repoman-2.3.9
Diffstat (limited to 'sci-biology/bwa/bwa-0.7.17.ebuild')
-rw-r--r-- | sci-biology/bwa/bwa-0.7.17.ebuild | 34 |
1 files changed, 34 insertions, 0 deletions
diff --git a/sci-biology/bwa/bwa-0.7.17.ebuild b/sci-biology/bwa/bwa-0.7.17.ebuild new file mode 100644 index 000000000..429ba43e6 --- /dev/null +++ b/sci-biology/bwa/bwa-0.7.17.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2018 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +inherit toolchain-funcs + +DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner" +HOMEPAGE="http://bio-bwa.sourceforge.net/" +SRC_URI="mirror://sourceforge/bio-bwa/${P}.tar.bz2" + +LICENSE="GPL-3" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86 ~x64-macos" + +RDEPEND="dev-lang/perl" + +PATCHES=( "${FILESDIR}"/${PN}-0.7.15-Makefile.patch ) +DOCS=( NEWS.md README-alt.md README.md ) + +src_configure() { + tc-export CC AR +} + +src_install() { + dobin bwa + + exeinto /usr/libexec/${PN} + doexe qualfa2fq.pl xa2multi.pl + + einstalldocs + doman bwa.1 +} |