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| author |   Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> | 2018-04-22 13:45:10 +0200 |
|---|---|---|
| committer | Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> | 2018-04-22 13:45:10 +0200 |
| commit | 8ee8fd95880516f79f8693c728d0ec218fa82277 (patch) | |
| tree | 91ddb4d0be642996ef475daf562578a6209276f1 /sci-biology/kat/kat-2.4.1.ebuild | |
| parent | sci-biology/kat: execute the build_boost.sh and autogen.sh logic (diff) | |
| download | sci-8ee8fd95880516f79f8693c728d0ec218fa82277.tar.gz sci-8ee8fd95880516f79f8693c728d0ec218fa82277.tar.bz2 sci-8ee8fd95880516f79f8693c728d0ec218fa82277.zip | |
sci-biology/kat: ignore site-wide boost-build/site-config.jam
Introduce -8888 ebuild which zaps bundled stuff altogether and uses
system-wide boost and jellyfish2 files.
Package-Manager: Portage-2.3.28, Repoman-2.3.9
Diffstat (limited to 'sci-biology/kat/kat-2.4.1.ebuild')
| -rw-r--r-- | sci-biology/kat/kat-2.4.1.ebuild | 7 |
1 files changed, 4 insertions, 3 deletions
diff --git a/sci-biology/kat/kat-2.4.1.ebuild b/sci-biology/kat/kat-2.4.1.ebuild index 1df9f4430..f1635e9e8 100644 --- a/sci-biology/kat/kat-2.4.1.ebuild +++ b/sci-biology/kat/kat-2.4.1.ebuild @@ -41,7 +41,7 @@ src_prepare(){ src_configure(){ local myconf=() myconf+=( --disable-gnuplot ) # python3 does better image rendering, no need for gnuplot - use cpu_flags_x86_sse && myconf+=( $(use_with cpu_flags_x86_sse sse) ) # pass down to jellyfish-2.20/configure + use cpu_flags_x86_sse && myconf+=( $(use_with cpu_flags_x86_sse sse) ) # pass down to jellyfish-2.2.0/configure PYTHON_VERSION=3 econf ${myconf[@]} } @@ -49,7 +49,8 @@ src_compile(){ # build_boost.sh cd deps/boost || die ./bootstrap.sh --prefix=build --with-libraries=chrono,exception,program_options,timer,filesystem,system,stacktrace || die - ./b2 headers || die - ./b2 install || die + # https://github.com/TGAC/KAT/issues/92#issuecomment-383373418 + ./b2 headers --ignore-site-config || die + ./b2 install --ignore-site-config || die cd ../.. || die } |