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| author |   Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> | 2018-04-12 09:29:17 +0200 |
|---|---|---|
| committer | Martin Mokrejs <mmokrejs@fold.natur.cuni.cz> | 2018-04-12 09:29:17 +0200 |
| commit | b9e06f46a3f5f869f54182fd19a01dffa34f4309 (patch) | |
| tree | 6bd8113839f9887ac03178abc9106c3c57f9e3d3 /sci-biology | |
| parent | sci-biology/genometools: bump 1.5.7 to 1.5.9 (diff) | |
| download | sci-b9e06f46a3f5f869f54182fd19a01dffa34f4309.tar.gz sci-b9e06f46a3f5f869f54182fd19a01dffa34f4309.tar.bz2 sci-b9e06f46a3f5f869f54182fd19a01dffa34f4309.zip | |
sci-biology/genometools: bump to 1.5.10
https://github.com/genometools/genometools/blob/master/CHANGELOG
changes in version 1.5.10 (2017-08-04)
- bugfixes and cleanups
- add Readjoiner output in GFA format
- improve building on GCC 7
- add arbitrary N values for `gt seqstat`
- install gtdata into $PREFIX/share/genometools by default
- improve robustness of test suite
- add Travis tests for Mac OS X
- `gt seed_extend` now speaks GFA2
- improvements to `gt seed_extend` w.r.t. runtime and
output format
- new implementation of functionality for computing
E-values for local alignments according to the
Karlin-Altschul statistics
Package-Manager: Portage-2.3.27, Repoman-2.3.9
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/genometools/Manifest | 2 | ||||
| -rw-r--r-- | sci-biology/genometools/genometools-1.5.10.ebuild (renamed from sci-biology/genometools/genometools-1.5.9.ebuild) | 0 |
2 files changed, 1 insertions, 1 deletions
diff --git a/sci-biology/genometools/Manifest b/sci-biology/genometools/Manifest index ab58b8ad3..64902c5ad 100644 --- a/sci-biology/genometools/Manifest +++ b/sci-biology/genometools/Manifest @@ -1 +1 @@ -DIST genometools-1.5.9.tar.gz 13344855 BLAKE2B 0cc62fbd460456159c5c2e5808707574a3fdbc973c64eeea370258b94048952d1a0b4389f3d0ae09b3d73641712c97c785293c7e9704dcb77ce86050ec5a105e SHA512 366b5c5d9fb7fd0a910a7d6d34912c07e65c88fb2acf3a911e49de909a345fb891b9f5433accf6738e99fefe390c42f2429f9c262ae3368313d2226680168690 +DIST genometools-1.5.10.tar.gz 13621729 BLAKE2B ba102a3b7503d2ea6507b3d9cf05ee6801f8638252ec9d373db1fddb6a615330946a81c9099097bc1e13151f57590a49055a1a41035b355f45ae99583b12af66 SHA512 4b1fa67a27f172b644e8b97b5e454ac715b9cefcfa5fb2e901e3ae06fe0ff22262c156c3ac2ffa576b198fd7f2550e6da3321b72d1a9ae34f5ddfd76499a7233 diff --git a/sci-biology/genometools/genometools-1.5.9.ebuild b/sci-biology/genometools/genometools-1.5.10.ebuild index 23fe474e2..23fe474e2 100644 --- a/sci-biology/genometools/genometools-1.5.9.ebuild +++ b/sci-biology/genometools/genometools-1.5.10.ebuild |