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authorSebastien Fabbro <seb@cayenne.ist.utl.pt>2009-07-28 00:54:35 +0100
committerSebastien Fabbro <seb@cayenne.ist.utl.pt>2009-07-28 00:54:35 +0100
commitde12fdcd9f3fafc7b392fa59e8d5f2f404e43d40 (patch)
tree7bf56dc034a8e3d5977baa240f8eea4bb224bd31 /sci-chemistry/jligand
parentsuff initial import (diff)
parentRASLIC license added (diff)
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Merge branch 'master' of git+ssh://git@git.overlays.gentoo.org/proj/sci
Diffstat (limited to 'sci-chemistry/jligand')
-rw-r--r--sci-chemistry/jligand/ChangeLog10
-rw-r--r--sci-chemistry/jligand/Manifest4
-rw-r--r--sci-chemistry/jligand/jligand-0.1.ebuild41
-rw-r--r--sci-chemistry/jligand/metadata.xml8
4 files changed, 63 insertions, 0 deletions
diff --git a/sci-chemistry/jligand/ChangeLog b/sci-chemistry/jligand/ChangeLog
new file mode 100644
index 000000000..c3d064bc1
--- /dev/null
+++ b/sci-chemistry/jligand/ChangeLog
@@ -0,0 +1,10 @@
+# ChangeLog for sci-chemistry/jligand
+# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*jligand-0.1 (26 Jul 2009)
+
+ 26 Jul 2009; Justin Lecher (jlec) <jlec@j-schmitz.net>
+ +jligand-0.1.ebuild, +metadata.xml:
+ new ebuild, written by me
+
diff --git a/sci-chemistry/jligand/Manifest b/sci-chemistry/jligand/Manifest
new file mode 100644
index 000000000..807f74f8e
--- /dev/null
+++ b/sci-chemistry/jligand/Manifest
@@ -0,0 +1,4 @@
+DIST JLigand_0.1_Source.tar 583680 RMD160 be71bdaeb1991c96c05d6864427606dbcad5c2eb SHA1 1805e737124c9fc483279a1aa37b0612a9e8d062 SHA256 12578dbe2212a6cc12ede15beecb6e20c5ba28a467883a881f700b908f493de6
+EBUILD jligand-0.1.ebuild 1079 RMD160 d4e7fc4f04fb8d17f4e1d1b7c8722e80e9b1f609 SHA1 c0c20c4719578acc2da1465a3259540ee6acdd59 SHA256 dce92c9463d78ec39d6035ae4a35d1445645282aa7fcc029aa15293407fe30b1
+MISC ChangeLog 274 RMD160 191da1077cab8086237bfbcb96e7d0fcd313a859 SHA1 7152a54527147adc6f35fbb0fec26a1cc70f7912 SHA256 a4c165f42617e7619b9eef2c3ae1266b6a4f465b41cd52497917c067bc4d4a49
+MISC metadata.xml 215 RMD160 bc9c07aa91f2f175542244e4e4522a73558210a1 SHA1 facb283386de1c0b6b938cdcd4dde04d1694298b SHA256 13f32353652adbd3d934d41381cfc2cacc9e1127c508cebc73806cc1026ee80c
diff --git a/sci-chemistry/jligand/jligand-0.1.ebuild b/sci-chemistry/jligand/jligand-0.1.ebuild
new file mode 100644
index 000000000..7336939b8
--- /dev/null
+++ b/sci-chemistry/jligand/jligand-0.1.ebuild
@@ -0,0 +1,41 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI="2"
+
+inherit java-pkg-2 java-ant-2 multilib
+
+MY_PN="JLigand"
+
+DESCRIPTION="a Java interface which allows links descriptions to be created"
+HOMEPAGE="http://www.ysbl.york.ac.uk/~pyoung/JLigand/JLigand.html"
+SRC_URI="http://www.ysbl.york.ac.uk/~pyoung/${MY_PN}/${MY_PN}_${PV}_Source.tar"
+
+LICENSE="ccp4"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+RDEPEND=">=virtual/jre-1.5
+ sci-chemistry/refmac
+ sci-libs/monomer-db"
+DEPEND=">=virtual/jdk-1.5"
+
+S="${WORKDIR}"/${MY_PN}
+
+EANT_EXTRA_ARGS="-Dfile.encoding=ISO-8859-1"
+
+src_install() {
+ java-pkg_dojar dist/${MY_PN}.jar
+ java-pkg_dolauncher ${PN} \
+ --main uk.ac.york.ysbl.JLigand \
+ --jar ${MY_PN}.jar \
+ --pkg_args "/usr/$(get_libdir)/${PN} ${CLIBD_MON} /usr/bin/libcheck /usr/bin/refmac"
+
+ insinto /usr/$(get_libdir)/${PN}
+ doins -r src/{images,resources} || die
+ fperms 775 /usr/$(get_libdir)/${PN}/resources/runLibcheck.csh || die
+ fperms 775 /usr/$(get_libdir)/${PN}/resources/runRefmac.csh || die
+}
+
diff --git a/sci-chemistry/jligand/metadata.xml b/sci-chemistry/jligand/metadata.xml
new file mode 100644
index 000000000..efb490d78
--- /dev/null
+++ b/sci-chemistry/jligand/metadata.xml
@@ -0,0 +1,8 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+<herd>sci</herd>
+<maintainer>
+ <email>sci@gentoo.org</email>
+</maintainer>
+</pkgmetadata>