aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
Diffstat (limited to 'sci-biology/arachne/arachne-46233.ebuild')
-rw-r--r--sci-biology/arachne/arachne-46233.ebuild39
1 files changed, 0 insertions, 39 deletions
diff --git a/sci-biology/arachne/arachne-46233.ebuild b/sci-biology/arachne/arachne-46233.ebuild
deleted file mode 100644
index b34d00134..000000000
--- a/sci-biology/arachne/arachne-46233.ebuild
+++ /dev/null
@@ -1,39 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-DESCRIPTION="Whole genome shotgun OLC assembler for Sanger reads (overlap-layout-contig)"
-HOMEPAGE="https://genome.cshlp.org/content/12/1/177.abstract"
-SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ARACHNE/latest_source_code/${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS=""
-IUSE="doc openmp"
-
-DEPEND="dev-libs/xerces-c
- doc? ( virtual/latex-base app-text/dvipsk )"
-RDEPEND="${DEPEND}"
-
-# needs >=g++-4.7 but does not compile with 5.3.0
-
-# --disable-openmp to disable requirement for OpenMP-capable compiler
-src_configure() {
- local myconf=()
- use openmp || myconf+=( --disable-openmp )
- econf ${myconf[@]}
-}
-
-# set the following environment variables
-# http://www.broadinstitute.org/crd/wiki/index.php/Setup
-#
-# ARACHNE_PRE
-# ARACHNE_BIN_DIR
-# ARACHNE_PRETTY_HELP
-
-pkg_postinst(){
- einfo "Please add these to your ~/.bashrc"
- einfo "limit stacksize 100000"
- einfo "limit datasize unlimited"
-}