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Diffstat (limited to 'sci-biology/pufferfish/files/pufferfish-do-not-fetch.patch')
-rw-r--r--sci-biology/pufferfish/files/pufferfish-do-not-fetch.patch31
1 files changed, 0 insertions, 31 deletions
diff --git a/sci-biology/pufferfish/files/pufferfish-do-not-fetch.patch b/sci-biology/pufferfish/files/pufferfish-do-not-fetch.patch
deleted file mode 100644
index c86fe847f..000000000
--- a/sci-biology/pufferfish/files/pufferfish-do-not-fetch.patch
+++ /dev/null
@@ -1,31 +0,0 @@
-diff --git a/CMakeLists.txt b/CMakeLists.txt
-index 7f1516a..90f7cdd 100644
---- a/CMakeLists.txt
-+++ b/CMakeLists.txt
-@@ -282,12 +282,9 @@ message("TBB_LIBRARIES = ${TBB_LIBRARIES}")
-
-
- ExternalProject_Add(libseqlib
--GIT_REPOSITORY https://github.com/COMBINE-lab/SeqLib.git
--GIT_TAG master
- UPDATE_COMMAND ""
- UPDATE_DISCONNECTED 1
- BUILD_IN_SOURCE TRUE
--DOWNLOAD_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/seqlib
- SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/seqlib
- INSTALL_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/install
- CONFIGURE_COMMAND ./configure
-@@ -300,13 +297,10 @@ INSTALL_COMMAND mkdir -p <INSTALL_DIR>/lib && mkdir -p <INSTALL_DIR>/include &
- )
-
- ExternalProject_Add(libSetCover
-- GIT_REPOSITORY https://github.com/martin-steinegger/setcover.git
-- GIT_TAG master
- UPDATE_COMMAND ""
- CONFIGURE_COMMAND ""
- UPDATE_DISCONNECTED 1
- BUILD_IN_SOURCE TRUE
-- DOWNLOAD_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/setcover
- SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/setcover
- INSTALL_DIR ${CMAKE_CURRENT_SOURCE_DIR}/external/install
- BUILD_COMMAND make -j8