aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
Diffstat (limited to 'sci-biology/pysamstats/pysamstats-1.1.2.ebuild')
-rw-r--r--sci-biology/pysamstats/pysamstats-1.1.2.ebuild30
1 files changed, 0 insertions, 30 deletions
diff --git a/sci-biology/pysamstats/pysamstats-1.1.2.ebuild b/sci-biology/pysamstats/pysamstats-1.1.2.ebuild
deleted file mode 100644
index 445ec2162..000000000
--- a/sci-biology/pysamstats/pysamstats-1.1.2.ebuild
+++ /dev/null
@@ -1,30 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{7,8,9} )
-
-inherit distutils-r1
-
-DESCRIPTION="Calculate stats against genome positions from SAM/BAM/CRAM file"
-HOMEPAGE="https://github.com/alimanfoo/pysamstats
- https://pypi.python.org/pypi/pysamstats"
-SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
-
-LICENSE="MIT"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-
-# TODO: fix this
-# ModuleNotFoundError: No module named 'pysamstats.opt'
-# happens even with the --install option
-RESTRICT="test"
-
-BDEPEND="dev-python/cython[${PYTHON_USEDEP}]"
-RDEPEND="
- dev-python/numpy[${PYTHON_USEDEP}]
- sci-biology/pysam[${PYTHON_USEDEP}]
-"
-
-distutils_enable_tests pytest