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* Revert "sci-biology/bowtie: drop old"Andrew Ammerlaan2021-03-166-0/+182
* sci-biology/minced: fix buildAndrew Ammerlaan2021-03-161-1/+1
* sci-biology/stringtie: fix checksum in manifestMartin Mokrejs2021-03-161-1/+1
* sci-biology/verifyBamID: fix checksum in ManifestMartin Mokrejs2021-03-161-1/+1
* dev-python/fslpy: remove trailing whitespaceAndrew Ammerlaan2021-03-151-2/+2
* dev-python/fslpy: Changes to resolve file collisionsAbstractMethod2021-03-152-3/+13
* dev-cpp/castxml: version bump 0.4.3Horea Christian2021-03-132-0/+36
* dev-cpp/castxml: fixed broken source dir specificationHorea Christian2021-03-131-1/+3
* sci-libs/itk: metadata indentationHorea Christian2021-03-131-5/+5
* sci-libs/itk: added optional USE flagHorea Christian2021-03-132-1/+3
* Revert "{metadata,profiles}: add the ability to mask per profile in overlay"Andrew Ammerlaan2021-03-136-27/+0
* {metadata,profiles}: add the ability to mask per profile in overlayAndrew Ammerlaan2021-03-136-0/+27
* dev-python/colorcet: fix indentationAndrew Ammerlaan2021-03-131-1/+1
* dev-python: add holoviz packagesleycec2021-03-1319-0/+264
* sci-libs/miopen: fix dep on dev-libs/halfAndrew Ammerlaan2021-03-131-4/+5
* dev-libs/half: add version 1.12.0Andrew Ammerlaan2021-03-132-0/+18
* licenses: clean up unused licensesAndrew Ammerlaan2021-03-061-453/+0
* sci-biology/twinscan: do not overwrite RESTRICTAndrew Ammerlaan2021-03-061-2/+1
* sci-biology/twinscan: PV instead of PAndrew Ammerlaan2021-03-061-1/+1
* sci-biology/twinscan: use ${P} in uriAndrew Ammerlaan2021-03-061-1/+1
* sci-biology/vcflib: add missing depAndrew Ammerlaan2021-03-061-0/+1
* sci-biology/tabixpp: add new dep for vcflibAndrew Ammerlaan2021-03-063-0/+41
* sci-biology/yaha: EAPI bumpAndrew Ammerlaan2021-03-061-3/+2
* sci-biology/vt: EAPI bumpAndrew Ammerlaan2021-03-061-2/+3
* sci-biology/verifyBamID: EAPI bump, bump libStatGen versionAndrew Ammerlaan2021-03-062-12/+11
* sci-biology/vcflib: EAPI bump, version bumpAndrew Ammerlaan2021-03-062-17/+23
* package.mask: mask trowel for removalAndrew Ammerlaan2021-03-061-0/+6
* sci-biology/trimmomatic: EAPI bumpAndrew Ammerlaan2021-03-062-5/+3
* sci-biology/trf-bin: EAPi bumpAndrew Ammerlaan2021-03-062-5/+3
* sci-biology/trans-abyss: update, fix install, EAPI bumpAndrew Ammerlaan2021-03-063-25/+36
* dev-python/python-igraph: version bump, fix buildAndrew Ammerlaan2021-03-062-0/+47
* sci-biology/tmhmm: EAPI bumpAndrew Ammerlaan2021-03-061-2/+3
* sci-biology/tigr-foundation-libs: EAPI bumpAndrew Ammerlaan2021-03-062-20/+20
* package.mask: mask tclust for removalAndrew Ammerlaan2021-03-061-0/+5
* sci-biology/singalp: fix headerAndrew Ammerlaan2021-03-061-1/+1
* sci-biology/stringtie: cleanup oldAndrew Ammerlaan2021-03-063-146/+0
* sci-biology/stringtie: EAPI bump, version bumpAndrew Ammerlaan2021-03-062-0/+30
* sci-biology/ssaha2-bin: EAPI bumpAndrew Ammerlaan2021-03-061-2/+1
* sci-biology/spm: cleanup oldAndrew Ammerlaan2021-03-063-74/+0
* sci-biology/spm: EAPI bump, version bumpAndrew Ammerlaan2021-03-064-4/+44
* sci-biology/snpomatic: EAPI bump, add keywordsAndrew Ammerlaan2021-03-062-8/+7
* sci-biology/singalp: EAPI bumpAndrew Ammerlaan2021-03-061-1/+2
* sci-biology/sickle: EAPI bumpAndrew Ammerlaan2021-03-062-24/+10
* sci-biology/sga: EAPI bumpAndrew Ammerlaan2021-03-061-10/+15
* sci-biology/sff_dump: EAPI bumpAndrew Ammerlaan2021-03-061-3/+3
* sci-biology/seqtools: EAPI bumpAndrew Ammerlaan2021-03-061-3/+2
* sci-biology/seqclean: EAPI bumpAndrew Ammerlaan2021-03-061-7/+8
* sci-biology/scythe: EAPI bumpAndrew Ammerlaan2021-03-061-8/+8
* package.mask: mask sclust for removalAndrew Ammerlaan2021-03-061-0/+5
* sci-biology/scan_for_matches: EAPI bumpAndrew Ammerlaan2021-03-061-6/+3