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* dev-perl/Text-RecordParser: EAPI bump, add missing depAndrew Ammerlaan2021-03-031-5/+8
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-perl/Text-Graph: EAPI bump, add missing depAndrew Ammerlaan2021-03-031-7/+8
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-perl/Set-IntSpan-Fast: EAPI bump, add missing depAndrew Ammerlaan2021-03-031-6/+7
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-perl/Scalar-Util-Numeric: EAPI bumpAndrew Ammerlaan2021-03-031-6/+4
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-perl/Log-Cabin: EAPI bumpAndrew Ammerlaan2021-03-031-6/+4
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-perl/DBIx-DBStag: EAPI bumpAndrew Ammerlaan2021-03-031-4/+3
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-perl/Bio-BigFile: EAPI bumpAndrew Ammerlaan2021-03-031-6/+9
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-perl/Bio-DB-Das-Chado: EAPI bumpAndrew Ammerlaan2021-03-032-5/+5
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-perl/BTLib: version bump 0.20Andrew Ammerlaan2021-03-032-0/+17
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-perl/BTLib: EAPI bumpAndrew Ammerlaan2021-03-031-5/+2
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-perl/Algorithm-Loops: EAPI bumpAndrew Ammerlaan2021-03-031-3/+2
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-lang/berkeley_upc_translator: cleanup oldAndrew Ammerlaan2021-03-035-122/+0
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-lang/berkeley_upc_translator: version bump 2.28.2Andrew Ammerlaan2021-03-032-0/+50
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-lang/yaggo: EAPI bumpAndrew Ammerlaan2021-03-031-6/+4
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-lang/berkeley_upc: cleanup oldAndrew Ammerlaan2021-03-035-232/+0
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-lang/berkeley_upc: version bump 2020.12.0Andrew Ammerlaan2021-03-032-0/+61
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* sci-biology/Sibelia: remove py2.7 rdep packageAndrew Ammerlaan2021-03-033-56/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/netcdf: EAPI bump, fix buildAndrew Ammerlaan2021-03-031-18/+21
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jrosetta: EAPI bumpAndrew Ammerlaan2021-03-031-5/+5
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jogl: drop oldAndrew Ammerlaan2021-03-032-73/+0
| | | | | | | scilab only works with 2.2.4 anyway Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jogl: EAPI bumpAndrew Ammerlaan2021-03-031-2/+3
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jlatexmath-fop: EAPI bumpAndrew Ammerlaan2021-03-032-9/+12
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jlatexmath: EAPI bumpAndrew Ammerlaan2021-03-031-5/+4
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/gluegen: also EAPI bump old versionAndrew Ammerlaan2021-03-037-26/+28
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* Revert "dev-java/gluegen: drop old"Andrew Ammerlaan2021-03-032-0/+68
| | | | | | | This reverts commit 7fbdaa9a64dea91d504889987eec93c1f32d2a7a. Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/gluegen: drop oldAndrew Ammerlaan2021-03-032-68/+0
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/gluegen: fix build, EAPI bumpAndrew Ammerlaan2021-03-037-23/+31
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/flexdock: drop oldAndrew Ammerlaan2021-03-032-49/+0
| | | | | | | scilab only works with the 1.2.4 version anyway Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/flexdock: EAPI bumpAndrew Ammerlaan2021-03-031-9/+11
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* app-text/zotero-bin: remove double PVAndrew Ammerlaan2021-03-022-2/+2
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* app-text/zotero-bin: minor version bumpAndrew Ammerlaan2021-03-022-1/+1
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* app-arch/libdeflate: version bump to 1.7Aisha Tammy2021-03-014-0/+61
| | | | | Package-Manager: Portage-3.0.14, Repoman-3.0.2 Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
* dev-libs/boost: restore patchesSam James2021-02-273-0/+80
| | | | | Closes: https://github.com/gentoo/sci/issues/1059 Signed-off-by: Sam James <sam@gentoo.org>
* sci-libs/flexiblas: add alternate BLAS/LAPACK switchAisha Tammy2021-02-264-0/+118
| | | | | Package-Manager: Portage-3.0.14, Repoman-3.0.2 Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
* dev-libs/memkind: version bump to 1.11.0Aisha Tammy2021-02-262-0/+55
| | | | | Package-Manager: Portage-3.0.14, Repoman-3.0.2 Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
* sci-mathematics/netgen: fixup dep, <sci-libs/metis-5.0 unavailableAndrew Ammerlaan2021-02-252-2/+2
| | | | | Package-Manager: Portage-3.0.15, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* licenses/* clean-up unused licensesAndrew Ammerlaan2021-02-252-144/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* */*: replace dead homepage compbio.dfci.harvard.edu to archive linkAndrew Ammerlaan2021-02-257-7/+7
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* sci-biology/prot4EST: update homepage: 500Andrew Ammerlaan2021-02-251-1/+1
| | | | | Package-Manager: Portage-3.0.15, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* sci-biology/miranda: update homepage: connect timeoutAndrew Ammerlaan2021-02-251-1/+1
| | | | | Package-Manager: Portage-3.0.15, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* sci-biology/dipy: update homepage: 404Andrew Ammerlaan2021-02-252-2/+2
| | | | | Package-Manager: Portage-3.0.15, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* sci-biology/BG7: update homepageAndrew Ammerlaan2021-02-251-2/+2
| | | | | Package-Manager: Portage-3.0.15, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* sci-mathematics/htk: drop dead packageAisha Tammy2021-02-254-149/+0
| | | | Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
* sci-mathematics/lie: fixup to EAPI 7Aisha Tammy2021-02-254-139/+122
| | | | | Package-Manager: Portage-3.0.14, Repoman-3.0.2 Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
* sci-libs/ensmallen: version bump to 2.16.0Aisha Tammy2021-02-252-0/+29
| | | | | Package-Manager: Portage-3.0.14, Repoman-3.0.2 Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
* dev-python/bokeh: version bump to 2.3.0Aisha Tammy2021-02-252-0/+87
| | | | | Package-Manager: Portage-3.0.14, Repoman-3.0.2 Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
* app-offic/visidata: use distutils_enable_testsWolfgang E. Sanyer2021-02-231-2/+3
| | | | | | Signed-off-by: Wolfgang E. Sanyer <WolfgangESanyer@gmail.com> Closes: https://github.com/gentoo/sci/pull/1057 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* app-office/visidata: add DISTUTILS_USE_SETUPTOOLS=rdependAndrew Ammerlaan2021-02-231-3/+4
| | | | | Package-Manager: Portage-3.0.14, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* app-office/visidata: bump to 2.1.1Wolfgang E. Sanyer2021-02-232-0/+83
| | | | | | Signed-off-by: Wolfgang E. Sanyer <WolfgangESanyer@gmail.com> Closes: https://github.com/gentoo/sci/pull/1041 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* net-misc/cernbox-client: Drop old version.Oliver Freyermuth2021-02-212-97/+0
| | | | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Oliver Freyermuth <o.freyermuth@googlemail.com> Closes: https://github.com/gentoo/sci/pull/1054 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>