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* sci-biology/afni: dependency updateHorea Christian2019-04-253-2/+5
* sci-biology/chiron: Fix RDEPEND issueMartin Mokrejs2019-04-131-3/+3
* sci-biology/behaviopy: new packageHorea Christian2019-04-084-0/+115
* sci-biology/ncbi-tools++: set -rpath-link to temp build locationMartin Mokrejs2019-04-052-3/+12
* sci-biology/velvetk: drop faulty software per its authorMartin Mokrejs2019-03-313-37/+0
* sci-biology/ncbi-tools++: document possible issue with buildsMartin Mokrejs2019-03-303-5/+8
* sci-biology/ncbi-tools++: version bumpMartin Mokrejs2019-03-302-0/+381
* sci-biology/KaKs_Calculator: and rewrite the checksum of courseMartin Mokrejs2019-03-301-1/+1
* sci-biology/KaKs_Calculator: another attempt at SRC_URIMartin Mokrejs2019-03-301-1/+1
* sci-biology/KaKs_Calculator: fix download URLMartin Mokrejs2019-03-301-1/+1
* sci-biology/bowtie: add another upstream patchMartin Mokrejs2019-03-303-1/+19
* sci-biology/repeatmasker: rewamp configuration codeMartin Mokrejs2019-03-296-224/+292
* sci-biology/repeatmasker-libraries: dohtml has been banned for EAPI 7Martin Mokrejs2019-03-292-2/+2
* sci-biology/augustus: fix typo in a comment lineMartin Mokrejs2019-03-291-1/+1
* sci-biology/augustus: adjust to current LICENSE, use ${PV}Martin Mokrejs2019-03-291-3/+3
* sci-biology/augustus: version bump, fix awful Makefile'sMartin Mokrejs2019-03-294-71/+120
* sci-biology/tablet: fix indentationMartin Mokrejs2019-03-281-1/+1
* sci-biology/ncbi-blast+: emphasize alternative building from sourcesMartin Mokrejs2019-03-281-1/+1
* sci-biology/repeatmasker-libraries: finish version bump, EAPI7, add KEYWORDSMartin Mokrejs2019-03-283-7/+7
* sci-biology/maker: some progress with the ebuild, empty KEYWORDSMartin Mokrejs2019-03-283-6/+167
* sci-biology/NGSTools: renamed into NGSEPcore and NGSEPpluginMartin Mokrejs2019-03-283-36/+0
* sci-biology/bowtie: patch --interleaved, add KEYWORDSMartin Mokrejs2019-03-272-3/+15
* sci-biology/NGSEPplugin: some progress with the packageMartin Mokrejs2019-03-273-0/+51
* sci-biology/NGSEPcore: some improvements with the packageMartin Mokrejs2019-03-273-0/+56
* sci-biology/bamql: switch to `$(use_enable ...)`Martin Mokrejs2019-03-262-8/+4
* sci-biology/bamql: remove dependency on llvm static libsMartin Mokrejs2019-03-263-10/+37
* sci-biology/ncbi-blast+: EAPI7 bump, remove unused variableMartin Mokrejs2019-03-255-11/+372
* sci-biology/tablet: still installs a mix of our and bundled jarsMartin Mokrejs2019-03-252-11/+35
* sci-biology/gffread: bump to 0.11.0, drop old patch, use sed hackeryMartin Mokrejs2019-03-253-46/+22
* sci-biology/bowtie: update SRC_URI and hash for 2.3.5Martin Mokrejs2019-03-252-1/+2
* sci-biology/tablet-bin: update licenseMartin Mokrejs2019-03-251-13/+1
* sci-biology/tablet-bin: use https for the new homepageMartin Mokrejs2019-03-251-1/+1
* sci-biology/tablet: update ebuildMartin Mokrejs2019-03-253-27/+26
* sci-biology/tablet: drop old versionMartin Mokrejs2019-03-251-51/+0
* sci-biology/tablet-bin: version bump, ebuild cleanupMartin Mokrejs2019-03-252-5/+6
* sci-biology/MolBioLib: fix RDEPEND.suspect at leastMartin Mokrejs2019-03-251-9/+10
* sci-biology/bamql: bump to EAPI7Martin Mokrejs2019-03-252-2/+2
* sci-biology/bamql: bump to version with less greedy LLVM linkingMartin Mokrejs2019-03-252-1/+1
* sci-biology/bamql: add IUSE="static-libs"Martin Mokrejs2019-03-233-7/+21
* sci-biology/CAT: add missing -lstdc++ -lm and drop -wMartin Mokrejs2019-03-072-8/+16
* sci-biology/CAT: new packageMartin Mokrejs2019-03-074-0/+58
* sci-biology/ParaAT: add missing default in src_prepare()Martin Mokrejs2019-03-071-0/+1
* sci-biology/KaKs_Calculator: new packageMartin Mokrejs2019-03-074-7/+80
* sci-biology/ParaAT: new packageMartin Mokrejs2019-03-073-0/+42
* sci-biology/afni: version bumpHorea Christian2019-03-022-0/+69
* sci-biology/canu: respect CXXFLAGSMartin Mokrejs2019-02-202-4/+143
* sci-biology/canu: add live package of a new toolMartin Mokrejs2019-02-202-0/+62
* sci-biology/bowtie: removing not working -1.2.2 ebuildMartin Mokrejs2019-02-192-78/+0
* sci-biology/bowtie: removing -9999 ebuildMartin Mokrejs2019-02-191-81/+0
* sci-biology/bowtie: working 1.2.2 snapshotMartin Mokrejs2019-02-193-0/+184