diff options
Diffstat (limited to 'sci-biology/iqpnni')
-rw-r--r-- | sci-biology/iqpnni/Manifest | 3 | ||||
-rw-r--r-- | sci-biology/iqpnni/files/iqpnni-3.3.1-gcc4.3.patch | 13 | ||||
-rw-r--r-- | sci-biology/iqpnni/iqpnni-3.2.ebuild | 26 | ||||
-rw-r--r-- | sci-biology/iqpnni/iqpnni-3.3.1.ebuild | 34 | ||||
-rw-r--r-- | sci-biology/iqpnni/iqpnni-3.3.2.ebuild | 28 | ||||
-rw-r--r-- | sci-biology/iqpnni/metadata.xml | 5 |
6 files changed, 109 insertions, 0 deletions
diff --git a/sci-biology/iqpnni/Manifest b/sci-biology/iqpnni/Manifest new file mode 100644 index 000000000000..ec521a7104b3 --- /dev/null +++ b/sci-biology/iqpnni/Manifest @@ -0,0 +1,3 @@ +DIST iqpnni-3.2.tar.gz 638743 SHA256 0e97a03841e3460b9e0ddadbfa27393bf370ff82725a620c8d46a1ce85e4a20f +DIST iqpnni-3.3.1.tar.gz 650395 SHA256 bdc5873c5dd59b07b8f8c9547e86120b53fa3cd802ec7acdad61bacc4c3ac7d9 +DIST iqpnni-3.3.2.tar.gz 646603 SHA256 e4ffc783c7444bfadd40c9d55e9fb0275fcf7dca80aa3217768c9bf63c28567f diff --git a/sci-biology/iqpnni/files/iqpnni-3.3.1-gcc4.3.patch b/sci-biology/iqpnni/files/iqpnni-3.3.1-gcc4.3.patch new file mode 100644 index 000000000000..c4f49284abc1 --- /dev/null +++ b/sci-biology/iqpnni/files/iqpnni-3.3.1-gcc4.3.patch @@ -0,0 +1,13 @@ +diff -rc iqpnni-3.3.1-orig/src/constant.h iqpnni-3.3.1/src/constant.h +*** iqpnni-3.3.1-orig/src/constant.h 2009-01-04 19:33:35.000000000 -0500 +--- iqpnni-3.3.1/src/constant.h 2009-01-04 19:40:21.000000000 -0500 +*************** +*** 36,41 **** +--- 36,42 ---- + #include <stdio.h> + #include <math.h> + #include <string> ++ #include <string.h> + + using namespace std; + diff --git a/sci-biology/iqpnni/iqpnni-3.2.ebuild b/sci-biology/iqpnni/iqpnni-3.2.ebuild new file mode 100644 index 000000000000..070e962fb311 --- /dev/null +++ b/sci-biology/iqpnni/iqpnni-3.2.ebuild @@ -0,0 +1,26 @@ +# Copyright 1999-2008 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +DESCRIPTION="Important Quartet Puzzling and NNI Operation" +HOMEPAGE="http://www.cibiv.at/software/iqpnni/" +SRC_URI="http://www.cibiv.at/software/iqpnni/${P}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="doc" + +DEPEND="" +RDEPEND="${DEPEND}" + +src_install() { + dobin src/iqpnni + + dodoc ChangeLog AUTHORS README NEWS TODO + if use doc ; then + dohtml manual/iqpnni-manual.html + insinto /usr/share/doc/${P} + doins manual/iqpnni-manual.pdf + fi +} diff --git a/sci-biology/iqpnni/iqpnni-3.3.1.ebuild b/sci-biology/iqpnni/iqpnni-3.3.1.ebuild new file mode 100644 index 000000000000..8916e7e51608 --- /dev/null +++ b/sci-biology/iqpnni/iqpnni-3.3.1.ebuild @@ -0,0 +1,34 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +inherit eutils + +DESCRIPTION="Important Quartet Puzzling and NNI Operation" +HOMEPAGE="http://www.cibiv.at/software/iqpnni/" +SRC_URI="http://www.cibiv.at/software/iqpnni/${P}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="amd64 x86" +IUSE="doc" + +DEPEND="" +RDEPEND="${DEPEND}" + +src_unpack() { + unpack ${A} + cd "${S}" + epatch "${FILESDIR}"/${P}-*.patch +} + +src_install() { + dobin src/iqpnni + + dodoc ChangeLog AUTHORS README NEWS TODO + if use doc ; then + dohtml manual/iqpnni-manual.html + insinto /usr/share/doc/${P} + doins manual/iqpnni-manual.pdf + fi +} diff --git a/sci-biology/iqpnni/iqpnni-3.3.2.ebuild b/sci-biology/iqpnni/iqpnni-3.3.2.ebuild new file mode 100644 index 000000000000..e9939ef0f506 --- /dev/null +++ b/sci-biology/iqpnni/iqpnni-3.3.2.ebuild @@ -0,0 +1,28 @@ +# Copyright 1999-2011 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=4 + +DESCRIPTION="Important Quartet Puzzling and NNI Operation" +HOMEPAGE="http://www.cibiv.at/software/iqpnni/" +SRC_URI="http://www.cibiv.at/software/iqpnni/${P}.tar.gz" + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="doc" + +DEPEND="" +RDEPEND="${DEPEND}" + +src_install() { + dobin src/iqpnni + + dodoc ChangeLog AUTHORS README NEWS TODO + if use doc ; then + dohtml manual/iqpnni-manual.html + insinto /usr/share/doc/${P} + doins manual/iqpnni-manual.pdf + fi +} diff --git a/sci-biology/iqpnni/metadata.xml b/sci-biology/iqpnni/metadata.xml new file mode 100644 index 000000000000..f17a827e3101 --- /dev/null +++ b/sci-biology/iqpnni/metadata.xml @@ -0,0 +1,5 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <herd>sci-biology</herd> +</pkgmetadata> |