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* sci-chemistry/massxpert: remove oldMichael Palimaka2015-11-173-141/+0
| | | | Package-Manager: portage-2.2.24
* sci-chemistry/pymol: Always use included apbs pluginJustin Lecher2015-11-125-122/+8
| | | | | | | | | Correctly block files collisions Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=565600 Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/sparky: Chop DESCRIPTIONJustin Lecher2015-11-111-1/+1
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/sparky: Adopt to ABIFLAGS change in pythonJustin Lecher2015-11-111-4/+6
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/openbabel-python: Adopt to ABIFLAGS change in pythonJustin Lecher2015-11-111-4/+4
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/pymol: x86 stable wrt bug #565494Agostino Sarubbo2015-11-111-1/+1
| | | | | Package-Manager: portage-2.2.20.1 RepoMan-Options: --include-arches="x86"
* sci-chemistry/pymol: amd64 stable wrt bug #565494Agostino Sarubbo2015-11-111-1/+1
| | | | | Package-Manager: portage-2.2.20.1 RepoMan-Options: --include-arches="amd64"
* sci-chemistry/pymol: Version BumpJustin Lecher2015-11-112-0/+114
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/pymol: Drop oldJustin Lecher2015-11-113-103/+1
| | | | | | | | | obsoletes Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=543018 Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/pymol: x86 stable wrt bug #543020Agostino Sarubbo2015-11-111-1/+1
| | | | | Package-Manager: portage-2.2.20.1 RepoMan-Options: --include-arches="x86"
* Sanitize virtual namespace of python packagesJustin Lecher2015-11-104-4/+4
| | | | | | Rename virtual/MODULE to virtual/python-MODULE Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/gromacs: Version bump! =DAlexey Shvetsov2015-11-092-0/+271
| | | | Package-Manager: portage-2.2.24
* sci-chemistry/openbabel: Only configure WxGtk with USE=wxwidgetsJustin Lecher2015-11-071-1/+1
| | | | | | | Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=565040 Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Remove hard masked packagePacho Ramos2015-11-0512-557/+0
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* sci-chemistry/openbabel: Drop oldJustin Lecher2015-11-041-81/+0
| | | | | | | | | | | obsoletes Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=449852 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=553104 Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/openbabel: ppc stable wrt bug #564280Agostino Sarubbo2015-11-041-1/+1
| | | | | Package-Manager: portage-2.2.20.1 RepoMan-Options: --include-arches="ppc"
* sci-chemistry/openbabel: x86 stable wrt bug #564280Mikle Kolyada2015-11-011-1/+1
| | | | Package-Manager: portage-2.2.20.1
* sci-chemistry/openbabel: amd64 stable wrt bug #564280Agostino Sarubbo2015-10-301-1/+1
| | | | | Package-Manager: portage-2.2.20.1 RepoMan-Options: --include-arches="amd64"
* sci-chemistry/openbabel-perl: Fix for gcc-5Justin Lecher2015-10-271-2/+6
| | | | | | | convert mycmakeargs to be an array Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/openbabel-python: Fix for gcc-5Justin Lecher2015-10-271-2/+6
| | | | | | | convert mycmakeargs to be an array Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/openbabel: Fix for gcc-5Justin Lecher2015-10-271-3/+11
| | | | | | | convert mycmakeargs to be an array Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/mustang: Version BumpJustin Lecher2015-10-273-55/+51
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop "CCP4: Software for Macromolecular Crystallography"Justin Lecher2015-10-26153-7838/+0
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | obsoletes: Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=160190 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=324059 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=332485 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=367771 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=367773 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=383227 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=448756 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=460502 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=460504 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=466936 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=467040 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=467048 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=476580 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478580 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478586 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478588 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478594 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478604 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=521646 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=528512 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=530878 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=540760 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=555614 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=556498 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=557038 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=561196 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=562780 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/wxmacmolplt: Support wxGTK:3.0Pacho Ramos2015-10-251-0/+47
| | | | Package-Manager: portage-2.2.23
* sci-chemistry/relax: Support wxGTK:3.0Pacho Ramos2015-10-251-0/+72
| | | | Package-Manager: portage-2.2.23
* sci-chemistry/openbabel: Support wxGTK:3.0Pacho Ramos2015-10-251-0/+82
| | | | Package-Manager: portage-2.2.23
* Drop deprecated usage of parallel python eclass functionsJustin Lecher2015-10-229-14/+14
| | | | | | | | Python eclasses dropped parallel execution support some while ago. python_parallel_foreach_impl was an alias for python_foreach_impl for some time already. Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/xdsgui: XDS dropped x86 supportJustin Lecher2015-10-191-2/+2
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/xdsstat-bin: XDS dropped x86 supportJustin Lecher2015-10-191-2/+2
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/xds-bin: Version BumpJustin Lecher2015-10-192-6/+4
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Update remote-idsJustin Lecher2015-10-163-6/+11
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/relax: Version BumpJustin Lecher2015-10-162-0/+72
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/gromacs: Version bumpAlexey Shvetsov2015-10-142-0/+286
| | | | Package-Manager: portage-2.2.23
* sci-chemistry/relax: Version BumpJustin Lecher2015-10-122-0/+72
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/relax: Drop oldJustin Lecher2015-10-125-288/+0
| | | | | Package-Manager: portage-2.2.22 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/pymol-plugins-dynamics: Version BumpJustin Lecher2015-10-122-0/+39
| | | | | Package-Manager: portage-2.2.22 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/prody: New PackageJustin Lecher2015-10-123-0/+53
| | | | | | | ebuild written by me Package-Manager: portage-2.2.22 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/platon: Version BumpJustin Lecher2015-10-102-5/+1
| | | | | | | | | drop obsolete patch Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=392061 Package-Manager: portage-2.2.22 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* fix various encoding corruptionMike Frysinger2015-10-101-1/+1
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* Add missing remote-id type=sourceforgeJustin Lecher2015-10-015-6/+19
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/coot: Don't set LD_LIBRARY_PATHJustin Lecher2015-09-251-0/+4
| | | | | Package-Manager: portage-2.2.21 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/coot: Add KEYWORDS backJustin Lecher2015-09-251-1/+1
| | | | | Package-Manager: portage-2.2.21 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* profiles: mask net-chemistry/icm-browser for removal. Bug #466724Dion Moult2015-09-242-4/+2
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* sci-chemistry/clashlist: Drop oldJustin Lecher2015-09-241-25/+0
| | | | | Package-Manager: portage-2.2.21 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/pymol: amd64 stable wrt bug #543020Agostino Sarubbo2015-09-241-1/+1
| | | | | Package-Manager: portage-2.2.20.1 RepoMan-Options: --include-arches="amd64"
* sci-chemistry/clashlist: amd64 stable wrt bug #547384Agostino Sarubbo2015-09-241-1/+1
| | | | | Package-Manager: portage-2.2.20.1 RepoMan-Options: --include-arches="amd64"
* profiles: mask sci-chemistry/babel for removal. Bug #552284Dion Moult2015-09-242-2/+0
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* sci-chemistry/votca-csgapps: version bumpChristoph Junghans2015-09-232-0/+33
| | | | Package-Manager: portage-2.2.20.1
* sci-chemistry/votca-csg: version bumpChristoph Junghans2015-09-232-0/+117
| | | | Package-Manager: portage-2.2.20.1
* Update hashes in ManifestJustin Lecher2015-09-2325-33/+33
| | | | | | Add missing SHA512 and WHIRLPOOL hashes Signed-off-by: Justin Lecher <jlec@gentoo.org>