dev-python/spyder: version bump 4.2.1

Closes: https://bugs.gentoo.org/755242
Package-Manager: Portage-3.0.12, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Closes: https://github.com/gentoo/gentoo/pull/18724
Signed-off-by: Joonas Niilola <juippis@gentoo.org>

3 files changed, 279 insertions, 0 deletions

diff --git a/dev-python/spyder/Manifest b/dev-python/spyder/Manifest
index 9932a8792c86..36a21c34b903 100644
--- a/dev-python/spyder/Manifest
+++ b/dev-python/spyder/Manifest
@@ -1,2 +1,4 @@
 DIST spyder-4.2.0.tar.gz 11840358 BLAKE2B 26e4cd9865196fb39fa5b49a17f172b3000fe27c5ab6fb1b31ed56d41f118e4016b6ed97ce8cb1b39c65031fc11413f8e426876d3dc8d5af25f12428d0e0c481 SHA512 c1460e2fe9a37c0e6107657de71205682018d87737b3eac16ec92c32d979bf727a6c8955bd2700872b6e91159d1a1efc57cdea52ffc44604fe34b78094de6e7f
+DIST spyder-4.2.1.tar.gz 12156626 BLAKE2B 4a009c8b2ebe1b71bb60c568d5e6a3d7616fba7f9988669e97a2454b6369421a8603495271ad4c275cae9ad7207f2666b28ecccb121b4cc5554a3d1a863a1579 SHA512 56975e851a05dd023d851adaff8e9a747f9b1aa626db8ce65f805e41c5c47dba017332e81bf9efaae65671e06bc7632a519def286568a8ed2f48b41aa285de62
+DIST spyder-docs-5c9c8a3317045c2d301e05b751943be9b521d129.tar.gz 66692311 BLAKE2B ec741a9cd830bc8a5776be1d52dcac9649c8abf33faec0ac8741d95625d8aeda2b8c0d2bdbef02c068a22ec62a4d5281a48e996530e1bd2e6de43b86e0a14ffe SHA512 73bd05ef31f69ebd80bb488017998536c4ed0e63a331efe743d9d858b936df287253f333d09beac6d2b249a96e8f82538d321850a64b0941db3d0141122995eb
 DIST spyder-docs-7fbdabcbc37fe696e4ad5604cdbf4023dfbe8b6c.tar.gz 58822544 BLAKE2B 9ddd662eb0e3b2845a15bc38a0ab994fcf43824a560cf635a29e16b5eb66407706a412ea50a2f8e5c0212675df3422ece649bd1e50e3ecd1c34ee5727f8a2df9 SHA512 ab30f287733681da0b1d15656a44cd320401330309efbff8f0a89f59a15d5c57532a2eab3e8353d8c3856eac0a393385a852663d6698d0a0d309def21d13933d
diff --git a/dev-python/spyder/files/spyder-4.2.1-build.patch b/dev-python/spyder/files/spyder-4.2.1-build.patch
new file mode 100644
index 000000000000..38d3356b0b3d
--- /dev/null
+++ b/dev-python/spyder/files/spyder-4.2.1-build.patch
@@ -0,0 +1,36 @@
+diff --git a/setup.py b/setup.py
+index 0c47210..20b95c0 100644
+--- a/setup.py
++++ b/setup.py
+@@ -97,21 +97,6 @@ def get_packages():
+     return packages
+ 
+ 
+-#==============================================================================
+-# Make Linux detect Spyder desktop file
+-#==============================================================================
+-class MyInstallData(install_data):
+-    def run(self):
+-        install_data.run(self)
+-        if sys.platform.startswith('linux'):
+-            try:
+-                subprocess.call(['update-desktop-database'])
+-            except:
+-                print("ERROR: unable to update desktop database",
+-                      file=sys.stderr)
+-CMDCLASS = {'install_data': MyInstallData}
+-
+-
+ #==============================================================================
+ # Main scripts
+ #==============================================================================
+@@ -177,8 +162,7 @@ def run(self):
+         'Intended Audience :: Developers',
+         'Topic :: Scientific/Engineering',
+         'Topic :: Software Development :: Widget Sets'
+-    ],
+-    cmdclass=CMDCLASS)
++    ])
+ 
+ 
+ #==============================================================================
diff --git a/dev-python/spyder/spyder-4.2.1.ebuild b/dev-python/spyder/spyder-4.2.1.ebuild
new file mode 100644
index 000000000000..858a74eb4022
--- /dev/null
+++ b/dev-python/spyder/spyder-4.2.1.ebuild
@@ -0,0 +1,241 @@
+# Copyright 1999-2021 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python3_{7,8} )
+
+inherit optfeature xdg distutils-r1
+
+# Commit of documentation to fetch
+DOCS_PV="5c9c8a3317045c2d301e05b751943be9b521d129"
+
+DESCRIPTION="The Scientific Python Development Environment"
+HOMEPAGE="
+	https://www.spyder-ide.org/
+	https://github.com/spyder-ide/spyder/
+	https://pypi.org/project/spyder/
+"
+SRC_URI="https://github.com/spyder-ide/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.gz
+	https://github.com/spyder-ide/${PN}-docs/archive/${DOCS_PV}.tar.gz -> ${PN}-docs-${DOCS_PV}.tar.gz"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+
+# The test suite often hangs or does not work.
+# Technically spyder requires pyqt5<13, which
+# we do not have in ::gentoo any more. Likely
+# this is the reason many of the tests fail
+# or hang. RESTRICTing because IMO it is
+# not worth the several hours I spend every
+# single version bump checking which tests
+# do and do not work. Spyder itself works
+# fine with pyqt5>13.
+RESTRICT="test"
+
+# White space separated deps are expansion of python-language-server[all] dep
+# As the pyls ebuild does not add flags for optional runtime dependencies
+# we have to manually specify these desp instead of just depending on the [all]
+# flag. The indentation allows us to distinguish them from spyders direct deps.
+RDEPEND="
+	>=dev-python/atomicwrites-1.2.0[${PYTHON_USEDEP}]
+	>=dev-python/chardet-2.0.0[${PYTHON_USEDEP}]
+	>=dev-python/cloudpickle-0.5.0[${PYTHON_USEDEP}]
+	dev-util/cookiecutter[${PYTHON_USEDEP}]
+	>=dev-python/diff-match-patch-20181111[${PYTHON_USEDEP}]
+	>=dev-python/intervaltree-3.0.2[${PYTHON_USEDEP}]
+	>=dev-python/ipython-7.6.0[${PYTHON_USEDEP}]
+	~dev-python/jedi-0.17.2[${PYTHON_USEDEP}]
+	>=dev-python/jsonschema-3.2.0[${PYTHON_USEDEP}]
+	>=dev-python/keyring-17.0.0[${PYTHON_USEDEP}]
+	>=dev-python/nbconvert-4.0[${PYTHON_USEDEP}]
+	>=dev-python/numpydoc-0.6.0[${PYTHON_USEDEP}]
+	~dev-python/parso-0.7.0[${PYTHON_USEDEP}]
+	>=dev-python/pexpect-4.4.0[${PYTHON_USEDEP}]
+	>=dev-python/pickleshare-0.4[${PYTHON_USEDEP}]
+	>=dev-python/psutil-5.3[${PYTHON_USEDEP}]
+	>=dev-python/pygments-2.0[${PYTHON_USEDEP}]
+	>=dev-python/pylint-1.0[${PYTHON_USEDEP}]
+	>=dev-python/python-language-server-0.36.2[${PYTHON_USEDEP}]
+
+	dev-python/autopep8[${PYTHON_USEDEP}]
+	>=dev-python/flake8-3.8.0[${PYTHON_USEDEP}]
+	>=dev-python/mccabe-0.6.0[${PYTHON_USEDEP}]
+	<dev-python/mccabe-0.7.0[${PYTHON_USEDEP}]
+	>=dev-python/pycodestyle-2.6.0[${PYTHON_USEDEP}]
+	<dev-python/pycodestyle-2.7.0[${PYTHON_USEDEP}]
+	>=dev-python/pydocstyle-2.0.0[${PYTHON_USEDEP}]
+	>=dev-python/pyflakes-2.2.0[${PYTHON_USEDEP}]
+	<dev-python/pyflakes-2.3.0[${PYTHON_USEDEP}]
+	dev-python/pylint[${PYTHON_USEDEP}]
+	>=dev-python/rope-0.10.5[${PYTHON_USEDEP}]
+	dev-python/yapf[${PYTHON_USEDEP}]
+
+	<dev-python/python-language-server-1.0.0[${PYTHON_USEDEP}]
+	>=dev-python/pyls-black-0.4.6[${PYTHON_USEDEP}]
+	>=dev-python/pyls-spyder-0.3.0[${PYTHON_USEDEP}]
+	>=dev-python/pyxdg-0.26[${PYTHON_USEDEP}]
+	>=dev-python/pyzmq-17.0.0[${PYTHON_USEDEP}]
+	>=dev-python/qdarkstyle-2.8[${PYTHON_USEDEP}]
+	>=dev-python/qtawesome-0.5.7[${PYTHON_USEDEP}]
+	>=dev-python/qtconsole-5.0.1[${PYTHON_USEDEP}]
+	>=dev-python/QtPy-1.5.0[${PYTHON_USEDEP},svg,webengine]
+	>=dev-python/sphinx-0.6.6[${PYTHON_USEDEP}]
+	>=dev-python/spyder-kernels-1.10.1[${PYTHON_USEDEP}]
+	<dev-python/spyder-kernels-1.11.0[${PYTHON_USEDEP}]
+	>=dev-python/textdistance-4.2.0[${PYTHON_USEDEP}]
+	>=dev-python/three-merge-0.1.1[${PYTHON_USEDEP}]
+	>=dev-python/watchdog-0.10.3[${PYTHON_USEDEP}]
+"
+
+BDEPEND="test? (
+	dev-python/cython[${PYTHON_USEDEP}]
+	dev-python/flaky[${PYTHON_USEDEP}]
+	dev-python/matplotlib[tk,${PYTHON_USEDEP}]
+	dev-python/mock[${PYTHON_USEDEP}]
+	dev-python/pandas[${PYTHON_USEDEP}]
+	dev-python/pillow[${PYTHON_USEDEP}]
+	<dev-python/pytest-6.0[${PYTHON_USEDEP}]
+	dev-python/pytest-lazy-fixture[${PYTHON_USEDEP}]
+	dev-python/pytest-mock[${PYTHON_USEDEP}]
+	dev-python/pytest-ordering[${PYTHON_USEDEP}]
+	dev-python/pytest-qt[${PYTHON_USEDEP}]
+	dev-python/pytest-xvfb[${PYTHON_USEDEP}]
+	dev-python/pyyaml[${PYTHON_USEDEP}]
+	dev-python/scipy[${PYTHON_USEDEP}]
+	dev-python/sympy[${PYTHON_USEDEP}]
+)"
+
+# Based on the courtesy of Arfrever
+# This patch removes a call to update-desktop-database during build
+# This fails because access is denied to this command during build
+PATCHES=(
+	"${FILESDIR}/${PN}-4.2.1-build.patch"
+	"${FILESDIR}/${PN}-4.1.5-doc-theme-renamed.patch"
+)
+
+DOCS=(
+	"AUTHORS.txt"
+	"Announcements.md"
+	"CHANGELOG.md"
+	"CODE_OF_CONDUCT.md"
+	"CONTRIBUTING.md"
+	"NOTICE.txt"
+	"README.md"
+	"RELEASE.md"
+)
+
+distutils_enable_tests pytest
+distutils_enable_sphinx docs/doc dev-python/sphinx-panels dev-python/pydata-sphinx-theme dev-python/sphinx-multiversion
+
+python_prepare_all() {
+	# move docs into workdir
+	mv ../spyder-docs-${DOCS_PV}* docs || die
+
+	# these deps are packaged separately: dev-python/spyder-kernels, dev-python/python-language-server
+	rm external-deps/* -r || die
+	# runs against things packaged in external-deps dir
+	rm conftest.py || die
+
+	# do not depend on pyqt5<13
+	sed -i -e '/pyqt5/d' \
+		-e '/pyqtwebengine/d' \
+			setup.py || die
+
+	# do not check deps, fails because we removed pyqt5 dependency above
+	sed -i -e 's:test_dependencies_for_spyder_setup_install_requires_in_sync:_&:' \
+		spyder/tests/test_dependencies_in_sync.py || die
+
+	# can't check for update, need network
+	rm spyder/workers/tests/test_update.py || die
+
+	# skip online test
+	rm spyder/widgets/github/tests/test_github_backend.py || die
+
+	# KeyError: 'conda: base', need conda??
+	sed -i -e 's:test_status_bar_conda_interpreter_status:_&:' \
+		spyder/widgets/tests/test_status.py || die
+
+	# assert 2 == 1
+	sed -i -e 's:test_pylint_max_history_conf:_&:' \
+		spyder/plugins/pylint/tests/test_pylint.py || die
+
+	# https://bugs.gentoo.org/747211
+	sed -i -e 's:test_loaded_and_closed_signals:_&:' \
+		spyder/plugins/projects/tests/test_plugin.py || die
+
+	# AssertionError: assert '' == 'This is some test text!'
+	sed -i -e 's:test_tab_copies_find_to_replace:_&:' \
+		spyder/plugins/editor/widgets/tests/test_editor.py || die
+
+	# hangs till forever
+	sed -i -e 's:test_help_opens_when_show_tutorial_full:_&:' \
+		spyder/app/tests/test_mainwindow.py || die
+
+	# Assertion error, can't connect/remember inside ebuild environment
+	rm spyder/plugins/ipythonconsole/widgets/tests/test_kernelconnect.py || die
+
+	# AssertionError: waitUntil timed out in 20000 miliseconds
+	sed -i -e 's:test_pdb_multiline:_&:' \
+		spyder/plugins/ipythonconsole/tests/test_ipythonconsole.py || die
+
+	# AssertionError: assert 'if True:\n    0\n    ' == 'if True:\n    0'
+	sed -i -e 's:test_undo_return:_&:' \
+		spyder/plugins/editor/widgets/tests/test_codeeditor.py || die
+
+	# assert False is True
+	sed -i -e 's:test_range_indicator_visible_on_hover_only:_&:' \
+		spyder/plugins/editor/panels/tests/test_scrollflag.py || die
+
+	# AssertionError: waitUntil timed out in 10000 miliseconds
+	sed -i -e 's:test_get_hints:_&:' \
+		spyder/plugins/editor/widgets/tests/test_hints_and_calltips.py || die
+
+	# Fatal Python error: Aborted
+	sed -i -e 's:test_module_completion:_&:' \
+		spyder/utils/introspection/tests/test_modulecompletion.py || die
+
+	# assert 0 > 0
+	sed -i -e 's:test_maininterpreter_page:_&:' \
+		spyder/preferences/tests/test_config_dialog.py || die
+
+	# This hangs forever
+	sed -i -e 's:test_load_kernel_file:_&:' \
+		-e 's:test_load_kernel_file_from_location:_&:' \
+		-e 's:test_load_kernel_file_from_id:_&:' \
+		spyder/plugins/ipythonconsole/tests/test_ipythonconsole.py || die
+
+	distutils-r1_python_prepare_all
+}
+
+# Calling pytest directly makes the tests freeze after completing even if successful
+# Exit code is nonzero even upon success, so can't add || die here
+# test results should be checked for success manually
+python_test() {
+	${EPYTHON} runtests.py
+}
+
+pkg_postinst() {
+	xdg_pkg_postinst
+
+	elog "To get additional features, optional runtime dependencies may be installed:"
+		optfeature "2D/3D plotting in the Python and IPython consoles" dev-python/matplotlib
+		optfeature "View and edit DataFrames and Series in the Variable Explorer" dev-python/pandas
+		optfeature "View and edit two or three dimensional arrays in the Variable Explorer" dev-python/numpy
+		optfeature "Symbolic mathematics in the IPython console" dev-python/sympy
+		optfeature "Import Matlab workspace files in the Variable Explorer" dev-python/scipy
+		optfeature "Run Cython files in the IPython console" dev-python/cython
+		optfeature "The hdf5/h5py plugin" dev-python/h5py
+		optfeature "The line profiler plugin" dev-python/spyder-line-profiler
+		optfeature "The memory profiler plugin" dev-python/spyder-memory-profiler
+		# spyder-autopep8 does not have a release (yet)
+		# and are not compatible with >=spyder-4.0.0 at the moment
+		# optfeature "The autopep8 plugin" dev-python/spyder-autopep8
+		optfeature "Vim key bindings" dev-python/spyder-vim
+		optfeature "Unittest support" dev-python/spyder-unittest
+		optfeature "Jupyter notebook support" dev-python/spyder-notebook
+		optfeature "System terminal inside spyder" dev-python/spyder-terminal
+		# spyder-reports not yet updated to >=spyder-4.0.0
+		# optfeature "Markdown reports using Pweave" dev-python/spyder-reports
+}