2021-12-28 08:22:05 UTC

4 files changed, 10 insertions, 10 deletions

diff --git a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1 b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
index e3348414c1a9..71a16e406694 100644
--- a/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
+++ b/metadata/md5-cache/sci-biology/GBrowse-2.48-r1
@@ -1,5 +1,5 @@
 DEFINED_PHASES=compile configure install postinst prepare prerm setup test unpack
-DEPEND=dev-perl/Module-Build dev-perl/Capture-Tiny !<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15
+DEPEND=dev-perl/Module-Build dev-perl/Capture-Tiny !<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] app-admin/webapp-config
 DESCRIPTION=Generic Model Organism Database Project - The Generic Genome Browser
 EAPI=5
 HOMEPAGE=http://gmod.org/wiki/GBrowse
@@ -7,8 +7,8 @@ INHERIT=perl-module webapp
 IUSE=minimal mysql postgres +sqlite vhosts
 KEYWORDS=~amd64 ~x86
 LICENSE=|| ( Artistic GPL-1+ )
-RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] >=app-admin/webapp-config-1.50.15
+RDEPEND=!<sci-biology/GBrowse-2.44-r1 >=sci-biology/bioperl-1.6.9 >=dev-perl/Bio-Graphics-2.09 >=dev-perl/GD-2.07 >=dev-perl/CGI-Session-4.02 dev-perl/IO-String dev-perl/JSON dev-perl/libwww-perl dev-perl/Statistics-Descriptive !minimal? ( dev-perl/Bio-Das >=dev-perl/Bio-SamTools-1.20 dev-perl/Crypt-SSLeay dev-perl/DB_File-Lock dev-perl/DBI mysql? ( dev-perl/DBD-mysql ) postgres? ( dev-perl/DBD-Pg ) sqlite? ( dev-perl/DBD-SQLite ) dev-perl/FCGI dev-perl/File-NFSLock dev-perl/GD-SVG dev-perl/Net-OpenID-Consumer dev-perl/Net-SMTP-SSL ) dev-lang/perl:=[-build(-)] app-admin/webapp-config
 SLOT=0
 SRC_URI=mirror://cpan/authors/id/L/LD/LDS/GBrowse-2.48.tar.gz
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+_eclasses_=desktop	c0d27bf73aa08ca05b663dbd31fbef28	edos2unix	33e347e171066657f91f8b0c72ec8773	estack	055c42df72f76a4f45ec92b35e83cd56	epatch	9f813bb3c47cf2e60619a663b87c5f4e	toolchain-funcs	badd6e329e1f3e6bee99b35bf8763ce8	multilib	8a0248f83ae77f945d376ff4a7953257	ltprune	4f3f2db5ce3ccbeeacdf3f94954043aa	preserve-libs	dbc9f8d2d49c66467bc327fddd8317bd	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	vcs-clean	b690a7e9b6c497cf59326a7545df4283	wrapper	4251d4c84c25f59094fd557e0063a974	eutils	dab5d8ec471d025b79c9e6906bcf3bff	multiprocessing	61c959fc55c15c00bbb1079d6a71370b	unpacker	928e1f35ef78ba9fc2b214e29c2b55a4	perl-functions	fea344a91ebf37efadf172c6a3de5a72	perl-module	bd9574a79c5f0a347a9ea3db5ad9ca72	webapp	60f2eb31dec733d05e8114cc078ebc33
 _md5_=088b19055886b41078acab0f96df204a
diff --git a/metadata/md5-cache/sci-biology/amap-2.2-r4 b/metadata/md5-cache/sci-biology/amap-2.2-r4
index 8d3880babe8d..ced31e30850a 100644
--- a/metadata/md5-cache/sci-biology/amap-2.2-r4
+++ b/metadata/md5-cache/sci-biology/amap-2.2-r4
@@ -1,5 +1,5 @@
 DEFINED_PHASES=compile configure install preinst prepare setup
-DEPEND=java? ( >=virtual/jdk-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 ) java? ( >=dev-java/ant-core-1.8.2:0 >=dev-java/javatoolkit-0.3.0-r2 )
+DEPEND=java? ( >=virtual/jdk-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 ) java? ( >=dev-java/ant-core-1.8.2:0 dev-java/javatoolkit )
 DESCRIPTION=Protein multiple-alignment-based sequence annealing
 EAPI=6
 HOMEPAGE=https://wiki.gentoo.org/wiki/No_homepage
@@ -10,5 +10,5 @@ LICENSE=GPL-2
 RDEPEND=java? ( >=virtual/jre-1.8:* ) java? ( >=dev-java/java-config-2.2.0-r3 )
 SLOT=0
 SRC_URI=http://baboon.math.berkeley.edu/amap/download/amap.2.2.tar.gz
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+_eclasses_=eapi7-ver	1a0a60ad07c8b32d2faba2d085dc0f24	desktop	c0d27bf73aa08ca05b663dbd31fbef28	edos2unix	33e347e171066657f91f8b0c72ec8773	estack	055c42df72f76a4f45ec92b35e83cd56	epatch	9f813bb3c47cf2e60619a663b87c5f4e	toolchain-funcs	badd6e329e1f3e6bee99b35bf8763ce8	multilib	8a0248f83ae77f945d376ff4a7953257	ltprune	4f3f2db5ce3ccbeeacdf3f94954043aa	preserve-libs	dbc9f8d2d49c66467bc327fddd8317bd	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	vcs-clean	b690a7e9b6c497cf59326a7545df4283	wrapper	4251d4c84c25f59094fd557e0063a974	eutils	dab5d8ec471d025b79c9e6906bcf3bff	versionator	d3fb3ba33acc3bbbdc4d7970227c100d	java-utils-2	32fe52795e36e76dcbcf92d89bb1c4d0	java-pkg-opt-2	e5029f11aa150c447c7e006015f84356	java-ant-2	262d853e2dd1056dc103b953dfc113b9
 _md5_=857434504156a8892f1335babe24f9f0
diff --git a/metadata/md5-cache/sci-biology/picard-1.103 b/metadata/md5-cache/sci-biology/picard-1.103
index a8f4477762d9..4c024642e323 100644
--- a/metadata/md5-cache/sci-biology/picard-1.103
+++ b/metadata/md5-cache/sci-biology/picard-1.103
@@ -1,5 +1,5 @@
 DEFINED_PHASES=compile configure install preinst prepare setup test
-DEPEND=>=virtual/jdk-1.6 dev-java/ant-apache-bcel:0 test? ( dev-java/testng:0 dev-lang/R ) dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons-jexl:2 dev-java/ant-core:0 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip ) >=dev-java/ant-core-1.8.2:0 dev-java/ant-apache-bcel dev-java/testng:0 dev-java/ant-junit4 >=dev-java/javatoolkit-0.3.0-r2
+DEPEND=>=virtual/jdk-1.6 dev-java/ant-apache-bcel:0 test? ( dev-java/testng:0 dev-lang/R ) dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons-jexl:2 dev-java/ant-core:0 >=dev-java/java-config-2.2.0-r3 source? ( app-arch/zip ) >=dev-java/ant-core-1.8.2:0 dev-java/ant-apache-bcel dev-java/testng:0 dev-java/ant-junit4 dev-java/javatoolkit
 DESCRIPTION=Java-based command-line utilities that manipulate SAM files
 EAPI=5
 HOMEPAGE=http://picard.sourceforge.net/
@@ -11,5 +11,5 @@ RDEPEND=>=virtual/jre-1.6 dev-java/snappy:1.0 dev-java/cofoja:0 dev-java/commons
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://dev.gentoo.org/~ercpe/distfiles/sci-biology/picard/picard-1.103.tar.bz2
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+_eclasses_=eapi7-ver	1a0a60ad07c8b32d2faba2d085dc0f24	desktop	c0d27bf73aa08ca05b663dbd31fbef28	edos2unix	33e347e171066657f91f8b0c72ec8773	estack	055c42df72f76a4f45ec92b35e83cd56	epatch	9f813bb3c47cf2e60619a663b87c5f4e	toolchain-funcs	badd6e329e1f3e6bee99b35bf8763ce8	multilib	8a0248f83ae77f945d376ff4a7953257	ltprune	4f3f2db5ce3ccbeeacdf3f94954043aa	preserve-libs	dbc9f8d2d49c66467bc327fddd8317bd	strip-linguas	ac3ee41ee2d31d8c41a77c0838320cc7	vcs-clean	b690a7e9b6c497cf59326a7545df4283	wrapper	4251d4c84c25f59094fd557e0063a974	eutils	dab5d8ec471d025b79c9e6906bcf3bff	versionator	d3fb3ba33acc3bbbdc4d7970227c100d	java-utils-2	32fe52795e36e76dcbcf92d89bb1c4d0	java-pkg-2	2d0eb1353bf1264bd6e61736d3e409a2	java-ant-2	262d853e2dd1056dc103b953dfc113b9
 _md5_=09627e6bb74ee9997324bde01a56bcbd
diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
index c9eff4c117be..c240338c1dd8 100644
--- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
+++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
@@ -1,5 +1,5 @@
 DEFINED_PHASES=compile install postinst prepare prerm setup
-DEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-browser-223 mysql? ( dev-db/mysql-connector-c:0= ) server? ( virtual/httpd-cgi ) app-arch/unzip >=app-admin/webapp-config-1.50.15
+DEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-browser-223 mysql? ( dev-db/mysql-connector-c:0= ) server? ( virtual/httpd-cgi ) app-arch/unzip app-admin/webapp-config
 DESCRIPTION=The UCSC genome browser suite, also known as Jim Kent's library and GoldenPath
 EAPI=6
 HOMEPAGE=http://genome.ucsc.edu/
@@ -7,9 +7,9 @@ INHERIT=toolchain-funcs flag-o-matic webapp
 IUSE=+mysql +server static-libs vhosts
 KEYWORDS=~amd64 ~x86
 LICENSE=blat
-RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-browser-223 mysql? ( dev-db/mysql-connector-c:0= ) server? ( virtual/httpd-cgi ) >=app-admin/webapp-config-1.50.15
+RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-browser-223 mysql? ( dev-db/mysql-connector-c:0= ) server? ( virtual/httpd-cgi ) app-admin/webapp-config
 REQUIRED_USE=server? ( mysql )
 SLOT=0
 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip
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 _md5_=35cb93e40ad2d78c190e860dd3944557