summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
authorJohannes Huber <johu@gentoo.org>2017-02-08 12:35:54 +0100
committerJohannes Huber <johu@gentoo.org>2017-02-08 12:36:27 +0100
commitc6ab3d3efa5f0b10bc6070967a2f435156488b32 (patch)
tree7fe34e08234fcd34a2c4491827294e0cb71b1714 /sci-biology/express
parentmail-client/claws-mail: Revbump to remove webkit support (bug #608612). (diff)
downloadgentoo-c6ab3d3efa5f0b10bc6070967a2f435156488b32.tar.gz
gentoo-c6ab3d3efa5f0b10bc6070967a2f435156488b32.tar.bz2
gentoo-c6ab3d3efa5f0b10bc6070967a2f435156488b32.zip
sci-biology/express: Remove 0.9.5 (r0)
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Diffstat (limited to 'sci-biology/express')
-rw-r--r--sci-biology/express/express-0.9.5.ebuild35
1 files changed, 0 insertions, 35 deletions
diff --git a/sci-biology/express/express-0.9.5.ebuild b/sci-biology/express/express-0.9.5.ebuild
deleted file mode 100644
index a4fcff4be4f5..000000000000
--- a/sci-biology/express/express-0.9.5.ebuild
+++ /dev/null
@@ -1,35 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=4
-
-inherit cmake-utils
-
-DESCRIPTION="Streaming RNA-Seq Analysis"
-HOMEPAGE="http://bio.math.berkeley.edu/eXpress/"
-SRC_URI="http://bio.math.berkeley.edu/eXpress/downloads/express-${PV}/express-${PV}-src.tgz"
-
-LICENSE="Artistic"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE=""
-
-DEPEND="
- dev-libs/boost
- sys-libs/zlib
- sci-biology/bamtools"
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${P}-src"
-
-CMAKE_USE_DIR="${S}/src"
-
-src_prepare() {
- sed \
- -e 's|"${CMAKE_CURRENT_SOURCE_DIR}/../bamtools/lib/libbamtools.a"|bamtools|' \
- -e '1 a find_package(Boost 1.46 COMPONENTS filesystem program_options thread)' \
- -e '1 a find_package(ZLIB)' \
- -e '/add_executable/ a include_directories("/usr/include/bamtools")' \
- -i src/CMakeLists.txt || die
-}