diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2016-07-31 16:13:47 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2016-07-31 17:35:49 +0000 |
| commit | 878ae9fced67cace8781f8bce1079f2cda86e6d4 (patch) | |
| tree | 464ade08fd902a517382ff83087fd97bd5610d51 /sci-biology/rebase | |
| parent | sys-apps/setserial: add patch for Darwin, bug #541536 (diff) | |
| download | gentoo-878ae9fced67cace8781f8bce1079f2cda86e6d4.tar.gz gentoo-878ae9fced67cace8781f8bce1079f2cda86e6d4.tar.bz2 gentoo-878ae9fced67cace8781f8bce1079f2cda86e6d4.zip | |
sci-biology/rebase: Version Bump
Package-Manager: portage-2.3.0
Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-biology/rebase')
| -rw-r--r-- | sci-biology/rebase/Manifest | 1 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-1608.ebuild | 46 |
2 files changed, 47 insertions, 0 deletions
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index f6e455097bf0..988fe246fa0e 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -1,3 +1,4 @@ DIST rebase-1602.tar.xz 101007300 SHA256 26257dc10a6aba54024772956ae03e8530d4b2176db60dcc386427196a936d0b SHA512 7a00a11019124a835ef3d328c33cc4ab9d59665b3c929cf02a44bc09de8ca53185b939057705ee6ce79eeddc9ca9b8246582895b949dd38abe9066a380e3a2c9 WHIRLPOOL fac62146ab6ff09895cc9e4ece2b4869910c90c342051c5446085267585362adcc8a30af66a58d068d86c3eb6e7a37ceb32224a69114aa629a62a958fae09ed0 DIST rebase-1604.tar.xz 102817536 SHA256 f234eadba5aa30573d664c9d9caab480ecbb383f0beab256e149296ee5d982ef SHA512 8ba6a24a8cf1b71a1ac2e0fb1634c0307d570af459fc940639046bd57362f3750e5f0390bcb7f3c7d2b924e1a5bf02825b5feb87a1f7d670d755f3b843df91a3 WHIRLPOOL 8ccaf435d7582fe1b86676037aaf7b0db742cd8d998a55d400f941a94e53731e1814028e1fed1be46f53bea702b570a1bffd73ba328ee06db17adcd731e3733c DIST rebase-1607.tar.xz 111124484 SHA256 2d795db3cc8cf7ff22eda983334e480b9c7b61c5b5ed9d38e2d626489fc4cefe SHA512 b166f75d6d82efe68f9e2521e26c7dc1bf34dde168d6eb94195f2f938316b0c7d06a11684de7d71e9bef2f3051a12c848c87a0d48bb6e148f6f84e9f694ced48 WHIRLPOOL 823054e6b366b707ba1be105fd6172f315358ba07ac8cfb7bbafdac3b9f14718e3406bb4b1c048b18dc8422ead4da09512b61758470bd5ca6a8d9141ebb5c578 +DIST rebase-1608.tar.xz 113417576 SHA256 ce8872adbe09c756af4bded43bde43e45d82b14642454fad05da8deef271bb81 SHA512 989d353cb9d73039d6c08805c4d32dbef1bdd37683f4c2ead5fa4889eae05bf3bdba54214d199b87961d8ace4d950f21dbc749e955867f8c6ccac766c7a06520 WHIRLPOOL bc89aa9230680ac08d3c17f7068bb45cb28dbf45038ffda5c2b4660fe366cdc32376ca32439953a2faa7524c6a5c4811a124288b85cf8320ef324458e3957d70 diff --git a/sci-biology/rebase/rebase-1608.ebuild b/sci-biology/rebase/rebase-1608.ebuild new file mode 100644 index 000000000000..9adb365ae5f1 --- /dev/null +++ b/sci-biology/rebase/rebase-1608.ebuild @@ -0,0 +1,46 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +MY_PV=${PV#1} + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +SLOT="0" +LICENSE="public-domain" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" +IUSE="emboss minimal" + +RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" +DEPEND="${RDEPEND}" + +RESTRICT="binchecks strip" + +src_compile() { + if use emboss; then + echo; einfo "Indexing Rebase for usage with EMBOSS." + mkdir REBASE || die + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ + -protofile proto.${MY_PV} -equivalences \ + || die "Indexing Rebase failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${MY_PV} proto.${MY_PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} + insinto /usr/share/EMBOSS/data + doins REBASE/embossre.equ + fi +} |