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authorDavid Seifert <soap@gentoo.org>2017-02-25 17:35:43 +0100
committerDavid Seifert <soap@gentoo.org>2017-02-25 18:13:02 +0100
commitadeefddadbab83e8ab35a0a7d6dcf1e6f2698b05 (patch)
tree3f787f2b49ec44a585b90574989a2fcc1a4c6afa /sci-biology/recon/files
parentsci-biology/kalign: Remove old (diff)
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sci-biology/recon: Remove old
Package-Manager: Portage-2.3.3, Repoman-2.3.1 Closes: https://github.com/gentoo/gentoo/pull/4076
Diffstat (limited to 'sci-biology/recon/files')
-rw-r--r--sci-biology/recon/files/1.06-buffer-overflow.patch13
-rw-r--r--sci-biology/recon/files/recon-1.06-respect.patch24
2 files changed, 0 insertions, 37 deletions
diff --git a/sci-biology/recon/files/1.06-buffer-overflow.patch b/sci-biology/recon/files/1.06-buffer-overflow.patch
deleted file mode 100644
index 29d220c7310d..000000000000
--- a/sci-biology/recon/files/1.06-buffer-overflow.patch
+++ /dev/null
@@ -1,13 +0,0 @@
-diff --git a/src/eledef.c b/src/eledef.c
-index 964890b..a001ec4 100644
---- a/src/eledef.c
-+++ b/src/eledef.c
-@@ -385,7 +385,7 @@ void ele_def(int method, FILE *frags, float cutoff, EPROT_t **all_epp, int *ecp,
-
- void img_charge(IPROT_t **shadow, int ct, FILE *input) {
- int i=0, pos=0;
-- char line[100];
-+ char line[256];
- int scan_flag;
- MSP_t msp;
-
diff --git a/sci-biology/recon/files/recon-1.06-respect.patch b/sci-biology/recon/files/recon-1.06-respect.patch
deleted file mode 100644
index a02038d84784..000000000000
--- a/sci-biology/recon/files/recon-1.06-respect.patch
+++ /dev/null
@@ -1,24 +0,0 @@
- src/Makefile | 4 ++--
- 1 file changed, 2 insertions(+), 2 deletions(-)
-
-diff --git a/src/Makefile b/src/Makefile
-index 36ef59b..e45a0f2 100644
---- a/src/Makefile
-+++ b/src/Makefile
-@@ -13,14 +13,14 @@ MANDIR = $(HOME)/man
- #SRCDIR = .
-
- ## your compiler
--CC = gcc
-+CC ?= gcc
- #CC = cc # for SGI Origin200 compiler#
-
- ## any special compiler flags you want
- # -pedantic clashes with -DMEMDEBUG??
- #
- #CFLAGS = -g -Wall -pedantic
--CFLAGS = -O
-+CFLAGS ?= -O
- #CFLAGS = -g
- #CFLAGS = -TARG:exc_max -64 -Ofast=ip27 #specific SGI Origin200 compiler#
-