diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2015-10-26 08:29:56 +0100 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2015-10-26 08:32:25 +0100 |
| commit | 7d62034735e700ca67e977470d79f5571b15b221 (patch) | |
| tree | 78d45bafd1284caf0c06b4b98131677301303cbb /sci-chemistry/ccp4i/files/6.1.3-rename-superpose.patch | |
| parent | add co-maintainer Coacher to metadata (diff) | |
| download | gentoo-7d62034735e700ca67e977470d79f5571b15b221.tar.gz gentoo-7d62034735e700ca67e977470d79f5571b15b221.tar.bz2 gentoo-7d62034735e700ca67e977470d79f5571b15b221.zip | |
Drop "CCP4: Software for Macromolecular Crystallography"
obsoletes:
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=160190
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=324059
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=332485
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=367771
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=367773
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=383227
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=448756
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=460502
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=460504
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=466936
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=467040
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=467048
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=476580
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478580
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478586
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478588
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478594
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=478604
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=521646
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=528512
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=530878
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=540760
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=555614
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=556498
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=557038
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=561196
Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=562780
Signed-off-by: Justin Lecher <jlec@gentoo.org>
Diffstat (limited to 'sci-chemistry/ccp4i/files/6.1.3-rename-superpose.patch')
| -rw-r--r-- | sci-chemistry/ccp4i/files/6.1.3-rename-superpose.patch | 26 |
1 files changed, 0 insertions, 26 deletions
diff --git a/sci-chemistry/ccp4i/files/6.1.3-rename-superpose.patch b/sci-chemistry/ccp4i/files/6.1.3-rename-superpose.patch deleted file mode 100644 index 74cd2b946601..000000000000 --- a/sci-chemistry/ccp4i/files/6.1.3-rename-superpose.patch +++ /dev/null @@ -1,26 +0,0 @@ -diff --git a/ccp4i/scripts/superpose.script b/ccp4i/scripts/superpose.script -index 3483c97..5027536 100755 ---- a/ccp4i/scripts/superpose.script -+++ b/ccp4i/scripts/superpose.script -@@ -21,7 +21,7 @@ - - if { [regexp SSM $SUPERPOSE_MODE ] } { - -- set cmd "[BinPath superpose] \"$XYZIN2\" -s $SSM_MOVING \"$XYZIN1\" -s $SSM_FIXED \"$XYZOUT_LOCAL\"" -+ set cmd "[BinPath superpose-ccp4] \"$XYZIN2\" -s $SSM_MOVING \"$XYZIN1\" -s $SSM_FIXED \"$XYZOUT_LOCAL\"" - set status [Execute $cmd "" program_status report ] - - } elseif { [regexp TOP $SUPERPOSE_MODE ] } { -diff --git a/ccp4i/tasks/superpose.tcl b/ccp4i/tasks/superpose.tcl -index 748bf6e..c92122a 100755 ---- a/ccp4i/tasks/superpose.tcl -+++ b/ccp4i/tasks/superpose.tcl -@@ -100,7 +100,7 @@ proc superpose_run { arrayname } { - # If user is match equivalent named residues/atoms then fit in the match fields - switch [GetValue $arrayname SUPERPOSE_MODE] \ - SSM { -- if { ![file exists [FindExecutable superpose]] } { -+ if { ![file exists [FindExecutable superpose-ccp4]] } { - WarningMessage "The program \"superpose\" is not on your path. - Check your installation for \"superpose\" program and \"ssm\" library." - return 0 |