proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

1 files changed, 58 insertions, 0 deletions

diff --git a/sci-libs/clipper/clipper-2.1_p100511-r1.ebuild b/sci-libs/clipper/clipper-2.1_p100511-r1.ebuild
new file mode 100644
index 000000000000..1757c6960b83
--- /dev/null
+++ b/sci-libs/clipper/clipper-2.1_p100511-r1.ebuild
@@ -0,0 +1,58 @@
+# Copyright 1999-2013 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=4
+
+AUTOTOOLS_AUTORECONF=true
+
+inherit autotools-utils eutils flag-o-matic
+
+MY_PV=${PV/_p/-}
+MY_P="${PN}-${MY_PV}"
+
+DESCRIPTION="Object-oriented libraries for crystallographic data and crystallographic computation"
+HOMEPAGE="http://www.ysbl.york.ac.uk/~cowtan/clipper/clipper.html"
+SRC_URI="http://www.ysbl.york.ac.uk/~cowtan/clipper/${MY_P}-ac.tar.gz"
+
+LICENSE="LGPL-2.1"
+SLOT="0"
+KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux"
+IUSE="debug static-libs"
+
+RDEPEND="
+	sci-libs/ccp4-libs
+	sci-libs/fftw
+	sci-libs/mmdb"
+DEPEND="${RDEPEND}"
+
+S="${WORKDIR}"/${PN}-2.1
+
+PATCHES=(
+	"${FILESDIR}"/20091215-missing-var.patch
+	"${FILESDIR}"/${PV}-makefile.patch
+	"${FILESDIR}"/${P}-outofsourcebuild.patch
+	)
+
+src_configure() {
+	# Recommended on ccp4bb/coot ML to fix crashes when calculating maps
+	# on 64-bit systems
+	append-flags -fno-strict-aliasing
+
+	local myeconfargs=(
+		--enable-ccp4
+		--enable-cif
+		--enable-cns
+		--enable-contrib
+		--enable-minimol
+		--enable-mmdb
+		--enable-phs
+		--with-mmdb="${EPREFIX}/usr"
+		$(use_enable debug)
+		)
+	autotools-utils_src_configure
+}
+
+src_test() {
+	emake -C "${AUTOTOOLS_BUILD_DIR}"/examples check
+}