sci-mathematics/gfan: remove old "unused" version and patches.

Package-Manager: Portage-2.3.89, Repoman-2.3.20
Signed-off-by: Michael Orlitzky <mjo@gentoo.org>

6 files changed, 0 insertions, 243 deletions

diff --git a/sci-mathematics/gfan/Manifest b/sci-mathematics/gfan/Manifest
index b0e6c30ed01b..23cbc2f60273 100644
--- a/sci-mathematics/gfan/Manifest
+++ b/sci-mathematics/gfan/Manifest
@@ -1,2 +1 @@
-DIST gfan0.5.tar.gz 1134987 BLAKE2B 73ea793f5dbceb76a9f143a258ee3e38e1466e4e15ed96dbabb58f33d3a091a885479dd00f8179d3bf2c85cf275605823f63aa33272f1f9984e0fc5841ab35e9 SHA512 11a9657adcd5b39f73244450c09b132d8cd19474d0f9151c0127682bc16847537e4096d39e8a0a63b5c6aef6720e54a72bfd361a5271808d5a5595fd2df494fa
 DIST gfan0.6.2.tar.gz 1321059 BLAKE2B 1ed61e1e084a1ceb65dd21848440bc3a90486c0ce4012b3b64c8029e89636696d2b0e5446ea156d2cf050b5db179c7c2f25c97e683cecf6e9616e8553d8513bf SHA512 5961820750af2522fdc1a86c0254742c3b003607a8707df5d6cd5f0bc6461e4d3db3b1d3cb537979d57eb9dff387974a58aeb91d0b5246d7c701cadc5a2cf4cf
diff --git a/sci-mathematics/gfan/files/gfan-0.5-double-declare-fix.patch b/sci-mathematics/gfan/files/gfan-0.5-double-declare-fix.patch
deleted file mode 100644
index 239540884011..000000000000
--- a/sci-mathematics/gfan/files/gfan-0.5-double-declare-fix.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff -U 3 -dHrN gfan0.5/app_minkowski.cpp gfan0.5-new/app_minkowski.cpp
---- gfan0.5/app_minkowski.cpp	2011-01-23 12:21:47.000000000 -0500
-+++ gfan0.5-new/app_minkowski.cpp	2012-06-29 15:23:48.604280985 -0400
-@@ -160,7 +160,7 @@
- 	    //log0 fprintf(Stderr,"4");
- 	    f.insert(c);
- 	    //log0 fprintf(Stderr,"5\n");
--	    static int i;
-+	    //	    static int i;
- 	    //log0 fprintf(Stderr,"inserted:%i\n",++i);
- 	  }
- 	log1 fprintf(Stderr,"Resolving symmetries.\n");
diff --git a/sci-mathematics/gfan/files/gfan-0.5-fix-build-system.patch b/sci-mathematics/gfan/files/gfan-0.5-fix-build-system.patch
deleted file mode 100644
index 3bf96ed088ce..000000000000
--- a/sci-mathematics/gfan/files/gfan-0.5-fix-build-system.patch
+++ /dev/null
@@ -1,55 +0,0 @@
---- a/Makefile
-+++ b/Makefile
-@@ -1,7 +1,5 @@
- ALL: default
- 
--# GPROFFLAG = -pg
-- GPROFFLAG = -g
- 
- PREFIX?=/usr/local
- 
-@@ -77,16 +75,13 @@
- 
- SHELL       = /bin/sh
- #ARCH        = LINUX
--CC          = gcc
- CLINKER     = $(CC)
--CXX         = g++
- CCLINKER    = $(CXX)
--#OPTFLAGS    = -O2 -DGMPRATIONAL -DNDEBUG
--OPTFLAGS    = -O2 -DGMPRATIONAL -Wuninitialized
- 
--CFLAGS	  = $(OPTFLAGS) $(GPROFFLAG) $(ADDITIONALINCLUDEOPTIONS) #-pedantic
--CCFLAGS	  = $(CFLAGS)
--FFLAGS	  = $(OPTFLAGS)
-+
-+CFLAGS      += $(GPROFFLAG) $(ADDITIONALINCLUDEOPTIONS) -Wuninitialized
-+CXXFLAGS    += $(GPROFFLAG) $(ADDITIONALINCLUDEOPTIONS) -Wuninitialized
-+CPPFLAGS    += -DGMPRATIONAL -DNDEBUG
- 
- CATSOBJECTS =	$(GCATSPATH)lp_cdd.o \
- 		$(SOPLEX_OBJECTS) \
-@@ -317,7 +312,7 @@
- default: $(OBJECTS) $(ADDITIONALOBJECTS) $(EXECS)
- 
- $(MAIN): $(OBJECTS)
--	$(CCLINKER) $(OBJECTS) $(ADDITIONALLINKOPTIONS) $(GPROFFLAG) -o $(MAIN)
-+	$(CCLINKER) $(LDFLAGS) $(OBJECTS) $(ADDITIONALLINKOPTIONS) $(GPROFFLAG) -o $(MAIN)
- 
- release:
- 	rm -f -r $(RELEASEDIR)/*
-@@ -430,14 +425,6 @@
- 	cp gfanlib.h gfanlib/
- 	cp gfanlib_* gfanlib/
- 	tar zcf -  gfanlib > gfanlib.tar.gz
--.c.o:
--	$(CC) $(CFLAGS) -c $<
--.cc.o:
--	$(CXX) -c $<
--.cpp.o:
--	$(CXX) $(CFLAGS) -c $<
--.C.o:
--	$(CXX) -c $<
- # wget http://ftp.sunet.se/pub/gnu/gmp/gmp-4.2.2.tar.gz
- # tar -xzvf gmp-4.2.2.tar.gz
- # cd gmp-4.2.2
diff --git a/sci-mathematics/gfan/files/gfan-0.5-fix-gcc9.patch b/sci-mathematics/gfan/files/gfan-0.5-fix-gcc9.patch
deleted file mode 100644
index 930baf9edcf2..000000000000
--- a/sci-mathematics/gfan/files/gfan-0.5-fix-gcc9.patch
+++ /dev/null
@@ -1,68 +0,0 @@
-https://bugs.gentoo.org/686484
-
-polyhedralfan.h: At global scope:
-polyhedralfan.h:77:24: error: friend declaration of ‘PolyhedralFan refinement(const PolyhedralFan&, const PolyhedralFan&, int, bool)’ specifies default arguments and isn’t a definition [-fpermissive]
-   77 |   friend PolyhedralFan refinement(const PolyhedralFan &a, const PolyhedralFan &b, int cutOffDimension=-1, bool allowASingleConeOfCutOffDimension=false);
-      |                        ^~~~~~~~~~
-
---- a/gfanlib_polyhedralfan.h
-+++ b/gfanlib_polyhedralfan.h
-@@ -24,6 +24,8 @@
- typedef std::map<int,IntVectorList> IncidenceList;
- 
- 
-+class PolyhedralFan;
-+PolyhedralFan refinement(const PolyhedralFan &a, const PolyhedralFan &b, int cutOffDimension=-1, bool allowASingleConeOfCutOffDimension=false);
- 
- /** A PolyhedralFan is simply a collection of canonicalized PolyhedralCones.
-  * It contains no combinatorial information in the sense of a polyhedral complex.
-@@ -52,7 +54,7 @@
-   int getAmbientDimension()const;
-   int getMaxDimension()const;
-   int getMinDimension()const;
--  friend PolyhedralFan refinement(const PolyhedralFan &a, const PolyhedralFan &b, int cutOffDimension=-1, bool allowASingleConeOfCutOffDimension=false);
-+  friend PolyhedralFan refinement(const PolyhedralFan &a, const PolyhedralFan &b, int cutOffDimension, bool allowASingleConeOfCutOffDimension);
-   ZMatrix getRays(int dim=1);//This can be called for other dimensions than 1. The term "Rays" still makes sense modulo the common linearity space
-   ZMatrix getRelativeInteriorPoints();
-   void insert(ZCone const &c);
---- a/halfopencone.h
-+++ b/halfopencone.h
-@@ -6,6 +6,9 @@
- 
- #include "polyhedralfan.h"
- 
-+class HalfOpenCone;
-+HalfOpenCone intersection(const HalfOpenCone &a, const HalfOpenCone &b, bool findFacets=false);
-+
- class HalfOpenCone{
-   static void appendList(IntegerVectorList &to, IntegerVectorList const &from, int appendValue);
-   int liftedDimension;//ambient
-@@ -18,7 +21,7 @@
-   HalfOpenCone(int dimension_, IntegerVectorList const &equations, IntegerVectorList const &nonstrict, IntegerVectorList const &strict, bool findFacets=false, bool canonicalize=false);
-   HalfOpenCone(int ambientDimension);//full space
-   bool isEmpty();
--  friend HalfOpenCone intersection(const HalfOpenCone &a, const HalfOpenCone &b, bool findFacets=false);
-+  friend HalfOpenCone intersection(const HalfOpenCone &a, const HalfOpenCone &b, bool findFacets);
-   friend bool haveEmptyIntersection(const HalfOpenCone &a, const HalfOpenCone &b);
-   PolyhedralCone closure();
-   void splitIntoRelativelyOpenCones(list<HalfOpenCone> &l);
---- a/polyhedralfan.h
-+++ b/polyhedralfan.h
-@@ -30,6 +30,8 @@
-   FPF_default=2+4+8
- };
- 
-+class PolyhedralFan;
-+PolyhedralFan refinement(const PolyhedralFan &a, const PolyhedralFan &b, int cutOffDimension=-1, bool allowASingleConeOfCutOffDimension=false);
- 
- /** A PolyhedralFan is simply a collection of canonicalized PolyhedralCones.
-  * It contains no combinatorial information in the sense of a polyhedral complex.
-@@ -74,7 +76,7 @@
-   int getAmbientDimension()const;
-   int getMaxDimension()const;
-   int getMinDimension()const;
--  friend PolyhedralFan refinement(const PolyhedralFan &a, const PolyhedralFan &b, int cutOffDimension=-1, bool allowASingleConeOfCutOffDimension=false);
-+  friend PolyhedralFan refinement(const PolyhedralFan &a, const PolyhedralFan &b, int cutOffDimension, bool allowASingleConeOfCutOffDimension);
-   friend PolyhedralFan product(const PolyhedralFan &a, const PolyhedralFan &b);
-   IntegerVectorList getRays(int dim=1);//This can be called for other dimensions than 1. The term "Rays" still makes sense modulo the common linearity space
-   IntegerVectorList getRelativeInteriorPoints();
diff --git a/sci-mathematics/gfan/files/gfan-0.5-gcc6.1-compat.patch b/sci-mathematics/gfan/files/gfan-0.5-gcc6.1-compat.patch
deleted file mode 100644
index 8479557b61bb..000000000000
--- a/sci-mathematics/gfan/files/gfan-0.5-gcc6.1-compat.patch
+++ /dev/null
@@ -1,70 +0,0 @@
---- a/app_fiberpolytope.cpp
-+++ b/app_fiberpolytope.cpp
-@@ -63,7 +63,7 @@
- 
- 	    /* If the vector configuration B does not have full rank then
- 	       change coordinates. */
--	    if(rank(B)!=B.getHeight())
-+	    if(rank_(B)!=B.getHeight())
- 	      {
- 	        FieldMatrix M=integerMatrixToFieldMatrix(B,Q);
- 	        M.reduce(false,true);//force integer operations - preserving volume
-@@ -83,7 +83,7 @@
- 	    log1 debug<<"Done computing restricting cone\n";
- 
- 	    debug<<B.getRows();
--	    debug<<int(rank(B));
-+	    debug<<int(rank_(B));
- 
- 	    Triangulation2 t(B);
- log1 debug<<"Computing initial triangulation\n";
-@@ -143,7 +143,7 @@
- */
-     /* If the vector configuration A does not have full rank then
-        change coordinates. */
--/*    if(rank(A)!=A.getHeight())
-+/*    if(rank_(A)!=A.getHeight())
-       {
- 	FieldMatrix M=integerMatrixToFieldMatrix(A,Q);
- 	M.reduce(false,true);//force integer operations - preserving volume
---- a/app_secondaryfan.cpp
-+++ b/app_secondaryfan.cpp
-@@ -307,7 +307,7 @@
- 
-     if(scaleOption.getValue())
-       {
--	if(rank(A)!=A.getHeight())
-+	if(rank_(A)!=A.getHeight())
- 	  {
- 	    cerr << "The vector configuration must have full rank in order to use the scale option.\n";
- 	    assert(0);
-@@ -342,7 +342,7 @@
- 
-     /* If the vector configuration A does not have full rank then
-        change coordinates. */
--    if(rank(A)!=A.getHeight())
-+    if(rank_(A)!=A.getHeight())
-       {
- 	FieldMatrix M=integerMatrixToFieldMatrix(A,Q);
- 	M.reduce(false,true);//force integer operations - preserving volume
---- a/matrix.cpp
-+++ b/matrix.cpp
-@@ -61,7 +61,7 @@
- 
- #include "linalg.h"
- 
--int rank(IntegerMatrix const &m)
-+int rank_(IntegerMatrix const &m)
- {
-   return integerMatrixToFieldMatrix(m,Q).rank();
- }
---- a/matrix.h
-+++ b/matrix.h
-@@ -147,6 +147,6 @@
- 
- FloatMatrix integerToFloatMatrix(IntegerMatrix const &m);
- IntegerVector flattenMatrix(IntegerMatrix const &m);
--int rank(IntegerMatrix const &m);
-+int rank_(IntegerMatrix const &m);
- 
- #endif
diff --git a/sci-mathematics/gfan/gfan-0.5-r1.ebuild b/sci-mathematics/gfan/gfan-0.5-r1.ebuild
deleted file mode 100644
index 1cd8c95fbecf..000000000000
--- a/sci-mathematics/gfan/gfan-0.5-r1.ebuild
+++ /dev/null
@@ -1,37 +0,0 @@
-# Copyright 1999-2019 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit toolchain-funcs
-
-DESCRIPTION="Compute Groebner fans and tropical varities"
-HOMEPAGE="http://www.math.tu-berlin.de/~jensen/software/gfan/gfan.html"
-SRC_URI="http://www.math.tu-berlin.de/~jensen/software/gfan/${PN}${PV}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux"
-
-DEPEND="
-	dev-libs/gmp:0=[cxx]
-	sci-libs/cddlib:0="
-RDEPEND="${DEPEND}"
-
-S="${WORKDIR}/${PN}${PV}/"
-
-PATCHES=(
-	"${FILESDIR}"/${P}-double-declare-fix.patch
-	"${FILESDIR}"/${P}-gcc6.1-compat.patch
-	"${FILESDIR}"/${P}-fix-build-system.patch
-	"${FILESDIR}"/${P}-fix-gcc9.patch
-)
-
-src_configure() {
-	tc-export CXX
-}
-
-src_install() {
-	emake PREFIX="${ED}/usr" install
-	einstalldocs
-}