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Diffstat (limited to 'sci-biology/amos/amos-3.1.0-r4.ebuild')
| -rw-r--r-- | sci-biology/amos/amos-3.1.0-r4.ebuild | 52 |
1 files changed, 0 insertions, 52 deletions
diff --git a/sci-biology/amos/amos-3.1.0-r4.ebuild b/sci-biology/amos/amos-3.1.0-r4.ebuild deleted file mode 100644 index 0dbcaffd81da..000000000000 --- a/sci-biology/amos/amos-3.1.0-r4.ebuild +++ /dev/null @@ -1,52 +0,0 @@ -# Copyright 1999-2018 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 ) - -inherit autotools flag-o-matic python-single-r1 - -DESCRIPTION="A Modular, Open-Source whole genome assembler" -HOMEPAGE="http://amos.sourceforge.net/" -SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz - https://dev.gentoo.org/~soap/distfiles/${PN}-3.1.0-fix-c++14.patch.bz2" - -LICENSE="Artistic" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -DEPEND="" -RDEPEND="${DEPEND} - ${PYTHON_DEPS} - dev-perl/DBI - dev-perl/Statistics-Descriptive - sci-biology/mummer" - -PATCHES=( - "${FILESDIR}"/${P}-gcc-4.7.patch - "${FILESDIR}"/${P}-goBambus2.py-indent-and-cleanup.patch - "${WORKDIR}"/${P}-fix-c++14.patch - "${FILESDIR}"/${P}-qa-Wformat.patch - "${FILESDIR}"/${P}-fix-build-system.patch -) - -src_prepare() { - default - eautoreconf - - # prevent GCC 6 log pollution due - # to hash_map deprecation in C++11 - append-cxxflags -Wno-cpp -} - -src_configure() { - econf --with-qmake-qt4=no -} - -src_install() { - default - python_fix_shebang "${ED%/}"/usr/bin/goBambus2 -} |