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Diffstat (limited to 'sci-biology/biopython/biopython-1.68.ebuild')
| -rw-r--r-- | sci-biology/biopython/biopython-1.68.ebuild | 55 |
1 files changed, 0 insertions, 55 deletions
diff --git a/sci-biology/biopython/biopython-1.68.ebuild b/sci-biology/biopython/biopython-1.68.ebuild deleted file mode 100644 index f76da59c1b84..000000000000 --- a/sci-biology/biopython/biopython-1.68.ebuild +++ /dev/null @@ -1,55 +0,0 @@ -# Copyright 1999-2019 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -PYTHON_COMPAT=( python2_7 python3_5 pypy ) - -inherit distutils-r1 eutils - -DESCRIPTION="Python modules for computational molecular biology" -HOMEPAGE="http://www.biopython.org/ https://pypi.org/project/biopython/" -SRC_URI="http://www.biopython.org/DIST/${P}.tar.gz" - -LICENSE="HPND" -SLOT="0" -KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux" -IUSE="" - -RDEPEND=" - dev-python/matplotlib[$(python_gen_usedep 'python*')] - dev-python/networkx[$(python_gen_usedep 'python*')] - dev-python/numpy[$(python_gen_usedep 'python*')] - dev-python/rdflib[$(python_gen_usedep 'python*')] - dev-python/pygraphviz[$(python_gen_usedep 'python2*')] - dev-python/reportlab[$(python_gen_usedep 'python*')] - dev-python/pydot[$(python_gen_usedep 'python2*')] - " -DEPEND="${RDEPEND} - sys-devel/flex" - -DOCS=( CONTRIB DEPRECATED NEWS README Doc/. ) - -python_test() { - distutils_install_for_testing - cp -r "${S}"/{Doc,Tests} "${TEST_DIR}"/lib/ || die - cd "${TEST_DIR}"/lib/Tests || die - rm test_BioSQL_{psycopg2.py,MySQLdb.py,mysql_connector.py} || die - ${PYTHON} run_tests.py --offline --verbose || die -} - -python_install_all() { - distutils-r1_python_install_all - - dodir /usr/share/${PN} - cp -r --preserve=mode Scripts Tests "${ED%/}"/usr/share/${PN} || die -} - -pkg_postinst() { - elog "For database support you need to install:" - optfeature "MySQL" dev-python/mysql-python - optfeature "PostGreSQL" dev-python/psycopg - elog - elog "Some applications need extra packages:" - optfeature "EMBOSS (The European Molecular Biology Open Software Suite)" sci-biology/emboss -} |