1 files changed, 0 insertions, 28 deletions
diff --git a/sci-biology/cufflinks/files/cufflinks-2.2.1-flags.patch b/sci-biology/cufflinks/files/cufflinks-2.2.1-flags.patch
deleted file mode 100644
index 47784088fab9..000000000000
--- a/sci-biology/cufflinks/files/cufflinks-2.2.1-flags.patch
+++ /dev/null
@@ -1,28 +0,0 @@
- configure.ac | 7 ++++---
- 1 file changed, 4 insertions(+), 3 deletions(-)
-
-diff --git a/configure.ac b/configure.ac
-index 96ffbac..e88b8e4 100755
---- a/configure.ac
-+++ b/configure.ac
-@@ -61,7 +61,8 @@ AC_CANONICAL_HOST
- 
- # set CFLAGS and CXXFLAGS
- user_CFLAGS=${CFLAGS}
--generic_CFLAGS="-Wall -Wno-strict-aliasing -g -gdwarf-2 -Wunused -Wuninitialized -ftemplate-depth-1024"
-+generic_CFLAGS="-Wall -Wno-strict-aliasing -Wunused -Wuninitialized"
-+generic_CXXFLAGS="-Wall -Wno-strict-aliasing -Wunused -Wuninitialized -ftemplate-depth-1024"
- ext_CFLAGS=""
- debug_CFLAGS=""
- #echo "${host_cpu}-${host_os}"
-@@ -106,8 +107,8 @@ AC_ARG_ENABLE(profiling,      [  --enable-profiling        enable profiling with
- 	  [ext_LDFLAGS="-lprofiler -ltcmalloc"], [])
- 	  
- CFLAGS="${generic_CFLAGS} ${ext_CFLAGS} ${user_CFLAGS} ${debug_CFLAGS} ${OPENMP_CFLAGS}"
--CXXFLAGS="$CFLAGS"
--CXXFLAGS="${CXXFLAGS} ${BOOST_CPPFLAGS} ${BAM_CPPFLAGS} ${EIGEN_CPPFLAGS}"
-+CXXFLAGS="${generic_CFLAGS} ${CXXFLAGS}"
-+CPPFLAGS="${CPPFLAGS} ${BOOST_CPPFLAGS} ${BAM_CPPFLAGS} ${EIGEN_CPPFLAGS}"
- user_LDFLAGS="$LDFLAGS"
- LDFLAGS="${ext_LDFLAGS} ${user_LDFLAGS}"
-