diff options
Diffstat (limited to 'sci-biology/phred/phred-071220-r2.ebuild')
-rw-r--r-- | sci-biology/phred/phred-071220-r2.ebuild | 46 |
1 files changed, 0 insertions, 46 deletions
diff --git a/sci-biology/phred/phred-071220-r2.ebuild b/sci-biology/phred/phred-071220-r2.ebuild deleted file mode 100644 index 2d33df654a1b..000000000000 --- a/sci-biology/phred/phred-071220-r2.ebuild +++ /dev/null @@ -1,46 +0,0 @@ -# Copyright 1999-2022 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=8 - -inherit toolchain-funcs - -DESCRIPTION="A base caller for Sanger DNA sequencing" -HOMEPAGE="http://phrap.org/phredphrapconsed.html" -SRC_URI="${PN}-dist-${PV}.b-acd.tar.gz" -S="${WORKDIR}" - -LICENSE="phrap" -SLOT="0" -KEYWORDS="~amd64 ~x86" -RESTRICT="fetch" - -PATCHES=( - "${FILESDIR}"/${PN}-071220-fix-build-system.patch - "${FILESDIR}"/${PN}-071220-fix-qa.patch -) - -pkg_nofetch() { - einfo "Please visit ${HOMEPAGE} and obtain the file" - einfo "${SRC_URI}, then place it into your DISTDIR directory." -} - -src_compile() { - emake CC="$(tc-getCC)" \ - CFLAGS="${CFLAGS}" \ - LDFLAGS="${LDFLAGS}" -} - -src_install() { - dobin phred daev - - insinto /usr/share/phred - doins phredpar.dat - - newenvd - 99phred <<- EOF - PHRED_PARAMETER_FILE="${EPREFIX}/usr/share/phred/phredpar.dat" - EOF - - newdoc DAEV.DOC DAEV.DOC.txt - newdoc PHRED.DOC PHRED.DOC.txt -} |