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Diffstat (limited to 'sci-biology/phred/phred-071220-r2.ebuild')
-rw-r--r--sci-biology/phred/phred-071220-r2.ebuild46
1 files changed, 0 insertions, 46 deletions
diff --git a/sci-biology/phred/phred-071220-r2.ebuild b/sci-biology/phred/phred-071220-r2.ebuild
deleted file mode 100644
index 2d33df654a1b..000000000000
--- a/sci-biology/phred/phred-071220-r2.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2022 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=8
-
-inherit toolchain-funcs
-
-DESCRIPTION="A base caller for Sanger DNA sequencing"
-HOMEPAGE="http://phrap.org/phredphrapconsed.html"
-SRC_URI="${PN}-dist-${PV}.b-acd.tar.gz"
-S="${WORKDIR}"
-
-LICENSE="phrap"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-RESTRICT="fetch"
-
-PATCHES=(
- "${FILESDIR}"/${PN}-071220-fix-build-system.patch
- "${FILESDIR}"/${PN}-071220-fix-qa.patch
-)
-
-pkg_nofetch() {
- einfo "Please visit ${HOMEPAGE} and obtain the file"
- einfo "${SRC_URI}, then place it into your DISTDIR directory."
-}
-
-src_compile() {
- emake CC="$(tc-getCC)" \
- CFLAGS="${CFLAGS}" \
- LDFLAGS="${LDFLAGS}"
-}
-
-src_install() {
- dobin phred daev
-
- insinto /usr/share/phred
- doins phredpar.dat
-
- newenvd - 99phred <<- EOF
- PHRED_PARAMETER_FILE="${EPREFIX}/usr/share/phred/phredpar.dat"
- EOF
-
- newdoc DAEV.DOC DAEV.DOC.txt
- newdoc PHRED.DOC PHRED.DOC.txt
-}